Gene BBta_0530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0530 
Symbol 
ID5155891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp521251 
End bp521886 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content61% 
IMG OID640555544 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_001236717 
Protein GI148252132 
COG category[T] Signal transduction mechanisms 
COG ID[COG4566] Response regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAC AAGCAAATTC CCGCGGTGAG ATTTTTGTCG TCGACGACGA TCCGGCCGTA 
CGCGACACAC TCTCGATGGT TTTGTCGGCC GGTGGCTACG AAGTTATCTG CTTCGCGGAT
GGCGCGGCGC TGCTGGCCGT TGCGCGAAGC CGGACGCCCG CCTGCATCCT GCTCGACGTG
CATATCCCCG GAAAGTCGGG CCTCGACATT CTCCGGGAAC TTCACGGCGA GGATTATCCC
GCGCCCATTT TCATGATTTC CGGGCAAGGA GATATTCCGA TGGCTGTGAA CGCCATCAAA
TACGGCGCCC TCGACTTCAT CGAGAAGCCG TTCCGGGGCA GCGAGATCGT GGCCCGCCTG
AACGAAGCGA TCGGCGCCTT CGCACGCCGA CAGAAGGAGA ATGCTTCGCC CAAGATCGGG
TCGCTGCATT TCCCCGGACG CGAACCGCTC ACGCGGCGCG AGCGCGAGGT GCTGGAACAG
TTCACGGCAG GTGCTTCGAA CAAGGAGGCG GGTCGCACGC TTGGCATCAG CCCGCGTACC
ATTGAGGACC ACCGCGCCAA CATCATGAAG AAGCTTGGAG CGCGGAATGC CGCCGATCTG
ATCCGCATCG TGATGACGGC GTCGCGTACC AATTAA
 
Protein sequence
MAEQANSRGE IFVVDDDPAV RDTLSMVLSA GGYEVICFAD GAALLAVARS RTPACILLDV 
HIPGKSGLDI LRELHGEDYP APIFMISGQG DIPMAVNAIK YGALDFIEKP FRGSEIVARL
NEAIGAFARR QKENASPKIG SLHFPGREPL TRREREVLEQ FTAGASNKEA GRTLGISPRT
IEDHRANIMK KLGARNAADL IRIVMTASRT N