Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0530 |
Symbol | |
ID | 5155891 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 521251 |
End bp | 521886 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640555544 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_001236717 |
Protein GI | 148252132 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4566] Response regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAAC AAGCAAATTC CCGCGGTGAG ATTTTTGTCG TCGACGACGA TCCGGCCGTA CGCGACACAC TCTCGATGGT TTTGTCGGCC GGTGGCTACG AAGTTATCTG CTTCGCGGAT GGCGCGGCGC TGCTGGCCGT TGCGCGAAGC CGGACGCCCG CCTGCATCCT GCTCGACGTG CATATCCCCG GAAAGTCGGG CCTCGACATT CTCCGGGAAC TTCACGGCGA GGATTATCCC GCGCCCATTT TCATGATTTC CGGGCAAGGA GATATTCCGA TGGCTGTGAA CGCCATCAAA TACGGCGCCC TCGACTTCAT CGAGAAGCCG TTCCGGGGCA GCGAGATCGT GGCCCGCCTG AACGAAGCGA TCGGCGCCTT CGCACGCCGA CAGAAGGAGA ATGCTTCGCC CAAGATCGGG TCGCTGCATT TCCCCGGACG CGAACCGCTC ACGCGGCGCG AGCGCGAGGT GCTGGAACAG TTCACGGCAG GTGCTTCGAA CAAGGAGGCG GGTCGCACGC TTGGCATCAG CCCGCGTACC ATTGAGGACC ACCGCGCCAA CATCATGAAG AAGCTTGGAG CGCGGAATGC CGCCGATCTG ATCCGCATCG TGATGACGGC GTCGCGTACC AATTAA
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Protein sequence | MAEQANSRGE IFVVDDDPAV RDTLSMVLSA GGYEVICFAD GAALLAVARS RTPACILLDV HIPGKSGLDI LRELHGEDYP APIFMISGQG DIPMAVNAIK YGALDFIEKP FRGSEIVARL NEAIGAFARR QKENASPKIG SLHFPGREPL TRREREVLEQ FTAGASNKEA GRTLGISPRT IEDHRANIMK KLGARNAADL IRIVMTASRT N
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