Gene BBta_0480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0480 
Symbol 
ID5152660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp475793 
End bp476311 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content68% 
IMG OID640555498 
Productputative transposase 
Protein accessionYP_001236671 
Protein GI148252086 
COG category[L] Replication, recombination and repair 
COG ID[COG3293] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.402578 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.226915 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATTTGA GCGAATTCTG GTTGAGTGAA GAGCAGTTCG AGCGGCTTCG GCCGCTGCTG 
CCGAGCAAGG TGCGCGGCGT TGCCCGGGTT GATGATCGGC GGGTGATCAG CGGCATCATC
CATGTCGTGA CGTCGGGCGG TCGCTGGGTC GATGCGCCGG CCTGCTACGA ACCGAGGAAG
ACGCTCTACA ACCGGTTCGT GCGCTGGGCG GCGAAGGGCG TGTGGCAGGA GCTGTTCGTG
ACGCTGGCAG CGGCGGGCGG ACCACCGGCC GAGGTTCTGA TCGACAGCAC GCACATGAAG
GCGCACCGCT CGGCGGGCGG CGGAAAGGGG GGCGCTCGTC CAGGCGATCG GGATCAGCCG
GGGCGGCCGC AACAGCAAGC TCCACGCCCT CACCGACGGC GAAGGCCGGC CGCTCCGCTT
CCTGCTGACC GGCGGCCAGG TCGCCGATTG CCGTGCGGTC GATGTCCTGT TGAACGATCT
TGCGGCCGGG ACCATCGTGC TCGGCGACAA GGCCTATGA
 
Protein sequence
MDLSEFWLSE EQFERLRPLL PSKVRGVARV DDRRVISGII HVVTSGGRWV DAPACYEPRK 
TLYNRFVRWA AKGVWQELFV TLAAAGGPPA EVLIDSTHMK AHRSAGGGKG GARPGDRDQP
GRPQQQAPRP HRRRRPAAPL PADRRPGRRL PCGRCPVERS CGRDHRARRQ GL