| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0429 |
|---|
| Symbol | |
|---|
| ID | 5155042 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 432049 |
|---|
| End bp | 432708 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640555447 |
|---|
| Product | putative 31 kDa outer-membrane immunogenic protein precursor |
|---|
| Protein accession | YP_001236621 |
|---|
| Protein GI | 148252036 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3637] Opacity protein and related surface antigens |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.22814 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGATCA CAGGCGCGAG CCATTGGGCG GCCGCCGTCG CGGCGACCGC GCTGGCCATG
ACGGGGGCAC GAGCGGCGGA TATGCCGGCC ACAACCTACA AGGCGCCGGC CTATGCCTCC
GCCCCGGCAC CGTTTTCGTG GACCGGCTTC TACGCCGGCG CCAATGTCGG TGGGGCGTTC
ACCGGCAATG ATTCAGTGAC GAACCTCGCC GGCGGCAATG GCGGGAAGCT CTCCGGCGTC
ATCGGCGGCA TGCAAGCGGG CTATAATTAC CAGGTCTCGC CGTTGTTCGT GGTCGGCATC
GAGAACGATC TCGATTTCAC CGGCCTCTCG CGCCAAGGCG ATCTGGTCAA TCCCGCGGTC
AGCGTGCCCT GGCTGACCAC GGGGCGCGCC CGCGCCGGCT TCACGATGCT CGACCAGCGC
CTGTTCCTGT ACGGGACGGC CGGTCTCGCG GCCGGCGAGT TGAAGGACGG CCCGGTCCAC
AAGGTGAAGA TGGGTTGGAC GGCGGGCGGC GGCGCGGAAT GGGCCTTCCT GCCGAAATGG
TCGGCCAAGC TTGAATATCT CTACACCGAC CTGAAGCACG ACGCTCTGCC GGACTGGCGT
GCGGCGAAGA TCCACAGCGT GCGGGTCGGC CTCAACTACC ATTTCGACCT GTTCCGCTGA
|
|---|
| Protein sequence | MRITGASHWA AAVAATALAM TGARAADMPA TTYKAPAYAS APAPFSWTGF YAGANVGGAF
TGNDSVTNLA GGNGGKLSGV IGGMQAGYNY QVSPLFVVGI ENDLDFTGLS RQGDLVNPAV
SVPWLTTGRA RAGFTMLDQR LFLYGTAGLA AGELKDGPVH KVKMGWTAGG GAEWAFLPKW
SAKLEYLYTD LKHDALPDWR AAKIHSVRVG LNYHFDLFR
|
|---|
| |