Gene BBta_0351 details

Gene Information

• Locus tag: BBta_0351
• Symbol: leuD
• ID: 5154227
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bradyrhizobium sp. BTAi1
• Kingdom: Bacteria
• Replicon accession: NC_009485
• Strand: -
• Start bp: 357863
• End bp: 358465
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 640555374
• Product: isopropylmalate isomerase small subunit
• Protein accession: YP_001236548
• Protein GI: 148251963
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0066] 3-isopropylmalate dehydratase small subunit
• TIGRFAM ID: [TIGR00171] 3-isopropylmalate dehydratase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 28
• Fosmid unclonability p-value: 0.289741
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGACAAGT TCACCACGCT GGAAGGCGTC GCTGCGCCGC TGAAGATCAT CAATGTCGAC 
ACCGACATGA TCATCCCCAA GCAGTACCTC AAGACCATCA AGCGCACCGG TCTCGGCAAG 
GGCCTGTTCT CGGAGCAGCG CTACAAGGAC GACGGCAGCG AGAACCCTGA TTTCGTCCTC 
AACCAGCCGG CCTATCGCAA CGCCAAGATC CTCGTCGCCG GCGACAATTT CGGCTGCGGC 
TCGAGCCGCG AGCACGCCCC CTGGGCGCTC CTGGACTTCG GCATCCGCTG CGTGATCTCG 
ACCTCGTTCG GCGACATTTT CTACAATAAC TGCTTCAAGA ACGGAATCTT GCCGATCCGC 
GTCTCGCAGG CCGATCTCGA CAAGCTGTTC GACGACGCCG AGCGCGGCGC CAATGCGACC 
CTGACGGTCG ACCTTGCGAG CCAGGAAATC CGCGGCCCCG ACGGCGGCAC GGTGAAATTC 
GACATTGACC CGTTCCGCAA GCACTGCCTG CTCAACGGGC TCGACGATAT CGGGCTGACG 
CTGGAGAAGA AGGCCTCGAT CGACAGCTAC GAGGCCAAGC TGGCGGAGCG CGCCTGGGCC 
TGA 

 

Protein sequence

MDKFTTLEGV AAPLKIINVD TDMIIPKQYL KTIKRTGLGK GLFSEQRYKD DGSENPDFVL 
NQPAYRNAKI LVAGDNFGCG SSREHAPWAL LDFGIRCVIS TSFGDIFYNN CFKNGILPIR 
VSQADLDKLF DDAERGANAT LTVDLASQEI RGPDGGTVKF DIDPFRKHCL LNGLDDIGLT 
LEKKASIDSY EAKLAERAWA