Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0308 |
Symbol | pncB |
ID | 5153185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 312105 |
End bp | 313409 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640555333 |
Product | nicotinate phosphoribosyltransferase |
Protein accession | YP_001236507 |
Protein GI | 148251922 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1488] Nicotinic acid phosphoribosyltransferase |
TIGRFAM ID | [TIGR01514] nicotinate phosphoribosyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.273883 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGTCA CAGATATCGC GAGCAGAACC TATAATCACG GCTGGCGCCT CGATCCGATC GTGCGCAGCC TGCTCGACAC CGATTTTTAT AAGCTGCTGA TGCTCCAGAT GATTCGGGAA TTCTACCCGG ATCAGAAGGT GACCTTTTCG GTGATCAACC GCACCAAGCG CGTGCGGCTG GGCGACGTCA TCGACGAGGG TGAGCTGCGC GCGCAGCTCG ACCACGCCCG CACCATCCGC TTCACCAAGA AGGAGCTGAT CTGGCTGGCC GGCAACACTT TCTACGGCAA GACCCACATG TTCTCGCCGG ACTTCCTGGC CTGGCTCGCC CATTTCCGCC TGCCCGATTA CGAGCTGCAC AAGGCCGACG GCCAGTATGA GTTGCATTTC CACGGGCCGT GGACCCACAC CACGATGTGG GAGATCCCGG CGCTGGCCAT CGTCAACGAG CTGCGCTCCC GGCAGGCGAT GAAGGGCCAG GGTCGTTTCG CGCTCGACGT GCTGTTCGCG CGCGCCAAGG CCAAGCTGTG GGCCAAGGTC GAGCGGCTGC GCAGACTGGA GGGGCTGCGG CTGTCGGATT TCGGCACCCG CCGCCGCCAC GGCTTCCTGT GGCAGCGCTG GTGTGTCGAG GCCGTCAAGG AAGGCCTGGG CCCATCCTTC ACCGGCACCT CGAACGTCCT GCTGGCGATG GACAATGATC TCGAAGCGAT CGGCACCAAC GCCCATGAGC TGCCGATGGT CGCGGCCGCG CTCGCCAGGG ATGACGACGA GCTGCGCTTT GCGCCGTACC GGATTCTCGA CCAATGGCGG CAGACCTATG CCGGCAACCT CCTGATCGCA TTGCCCGACG CGTTCGGTAC CAAGGCCTTC TTGCGCGATG CGCCGGACTG GGTTGCCGAC TGGACCGGCT TCCGTCCCGA CAGCGCGCCA CCGATCGAGG CCGGCGAGGA GATCATCGCC TGGTGGAAGT CGAAGGGCCG CGATCCCAAG CAGAAGCTCT TGGTGTTCTC CGATGCGATG GATGTCGAAT CGATCGAGCA GATCCATCAT CGCTTCTCCG ACCGGGTGCG GCTGTCATTC GGCTGGGGTA CCAACCTGAC CAACGACTTC GTCGGCTGCG CGCCGGACGG CTCGGTCGAT CTCGACCCGA TTTCGCTGGT CTGCAAGGTC ACGTCAGTCG ACGGCCAGCC CGCGGTAAAA CTGTCCGACA ACCCGGAGAA GGCGACCGGC GATCCCGCAG AGATCGCCCG TTACCTGCGC GTGTTCGGCG ATGCCGGCCG GGTGCGGACG CCCGTGGTCG TCTGA
|
Protein sequence | MTVTDIASRT YNHGWRLDPI VRSLLDTDFY KLLMLQMIRE FYPDQKVTFS VINRTKRVRL GDVIDEGELR AQLDHARTIR FTKKELIWLA GNTFYGKTHM FSPDFLAWLA HFRLPDYELH KADGQYELHF HGPWTHTTMW EIPALAIVNE LRSRQAMKGQ GRFALDVLFA RAKAKLWAKV ERLRRLEGLR LSDFGTRRRH GFLWQRWCVE AVKEGLGPSF TGTSNVLLAM DNDLEAIGTN AHELPMVAAA LARDDDELRF APYRILDQWR QTYAGNLLIA LPDAFGTKAF LRDAPDWVAD WTGFRPDSAP PIEAGEEIIA WWKSKGRDPK QKLLVFSDAM DVESIEQIHH RFSDRVRLSF GWGTNLTNDF VGCAPDGSVD LDPISLVCKV TSVDGQPAVK LSDNPEKATG DPAEIARYLR VFGDAGRVRT PVVV
|
| |