Gene BBta_0305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0305 
Symbol 
ID5153243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp308496 
End bp309170 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content64% 
IMG OID640555329 
ProductLon family ATP-dependent protease 
Protein accessionYP_001236504 
Protein GI148251919 
COG category[R] General function prediction only 
COG ID[COG2802] Uncharacterized protein, similar to the N-terminal domain of Lon protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.257248 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATCA ATGCCGAATA TCGCGGTCCT GCCGAACTGC CGAAGGTCAT TCCGGTGTTT 
CCGCTGGCCG GCGCCCTGCT GCTGCCGCGC GGCCAAATGC CGCTCAACAT TTTCGAGCCG
CGCTATCTCG CGATGGTCGA CGACGCGTTT CGCGACGGTC GTCGGCTGAT CGGGATGATC
CAGCCTGACG TCAGCCATTC TTCCAGCGAG GAGCGTCCGG CCCTTTTCAA GGTGGGCTGC
GTCGGCAGGA TCACGCAACT CGCCGAGTCC GGCGACGGGC GCTACATCCT CGAACTGACC
GGCGTGTCCC GCTTCAAGGT CGTCGAGGAG ATGTCGGTGC TGACGCCGTA CCGGCAGTGC
AAGGTCGACT ATTTTCCGTA TGTCGACGAC TTCAAGGCCC GCAAGGGCGA GGACGCCGTT
GATCGCGAGG CGCTGCTGGC CGTTCTCACC GACTTCCTGA AGGCCAACAA TCTCAAGGTC
GACTGGGCGG GCATCGAGGC GGCCCCGAAC GAGGCGCTCG TCAACGCGCT GGCCATGATG
TCGCCGTATG GTCCGGCCGA GAAGCAGGCC ATGCTCGAAG CGCCGGACCT GAAAACCCGC
GCCGAGATCC TGATCGCCGT GACCGAGATG GATCTCGCAA AGAAGCGGAC CTCGGGCGAT
CCGCCGCTGC AATGA
 
Protein sequence
MPINAEYRGP AELPKVIPVF PLAGALLLPR GQMPLNIFEP RYLAMVDDAF RDGRRLIGMI 
QPDVSHSSSE ERPALFKVGC VGRITQLAES GDGRYILELT GVSRFKVVEE MSVLTPYRQC
KVDYFPYVDD FKARKGEDAV DREALLAVLT DFLKANNLKV DWAGIEAAPN EALVNALAMM
SPYGPAEKQA MLEAPDLKTR AEILIAVTEM DLAKKRTSGD PPLQ