| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0231 |
|---|
| Symbol | sdhB |
|---|
| ID | 5151379 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 236763 |
|---|
| End bp | 237545 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640555256 |
|---|
| Product | succinate dehydrogenase iron-sulfur subunit |
|---|
| Protein accession | YP_001236433 |
|---|
| Protein GI | 148251848 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
|---|
| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.750525 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAGT TCGCACTTCC CAAGAATTCG CAGATCACCG GCGGCAAGAC CTGGCCGAAG
CCGGTGGGCG CTACCGAGGT CCGCGAGTTC AAGGTCTATC GTTGGAATCC GGATGACGGC
AAGAATCCGA GCGTTGATAC CTATTATGTC GACGTCAATG ATTGCGGCCC GATGGTGCTC
GACGGTCTGA TCTGGATCAA GAACCATATC GATCCGTCGC TGACCTTCCG CCGCTCCTGC
CGCGAGGGCG TGTGCGGCTC CTGCGCGATG AACATCGACG GCCAGAACAC CCTGGCCTGC
ACCAAGTCGA TGCACGACGT GAAGGATGGC GCGGTCAAGA TCAACCCGCT GCCGCATCAG
CCGGTGGTCA AGGACCTCGT ACCGGATCTC ACCAACTTCT ACGCGCAATA CGCTTCGATC
GAGCCGTGGT TGAAGACGAC CTCGCCGACG CCGCAGAAGG AATGGCGGCA GAGCCACGAG
GATCGCGAAA AGCTCGACGG TCTCTACGAG TGCATCCTGT GCGCCTGCTG CTCGACCTCG
TGCCCGAGCT ATTGGTGGAA CAGCCAGCGC TATCTCGGAC CGGCGGCGCT GCTGCAGGCC
AACCGGTGGG TCAAGGACAG CCGCGACGAG GCGACCGGCG AGCGGCTCGA CAATCTCGAG
GACCCGTTCC GGCTCTACCG CTGCCACACC ATCATGAATT GCGCCAAGGC CTGCCCGAAG
GGCCTCAACC CGGCCGAGGC GATCGCCGAG CTCAAGCTGA AGCTGGTCGA GCGCCAGATC
TAG
|
|---|
| Protein sequence | MAEFALPKNS QITGGKTWPK PVGATEVREF KVYRWNPDDG KNPSVDTYYV DVNDCGPMVL
DGLIWIKNHI DPSLTFRRSC REGVCGSCAM NIDGQNTLAC TKSMHDVKDG AVKINPLPHQ
PVVKDLVPDL TNFYAQYASI EPWLKTTSPT PQKEWRQSHE DREKLDGLYE CILCACCSTS
CPSYWWNSQR YLGPAALLQA NRWVKDSRDE ATGERLDNLE DPFRLYRCHT IMNCAKACPK
GLNPAEAIAE LKLKLVERQI
|
|---|
| |