Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0218 |
Symbol | infC |
ID | 5151301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 224542 |
End bp | 225144 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640555243 |
Product | translation initiation factor IF-3 |
Protein accession | YP_001236421 |
Protein GI | 148251836 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0290] Translation initiation factor 3 (IF-3) |
TIGRFAM ID | [TIGR00168] translation initiation factor IF-3 |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCCGCAA AGGCATATTC CTTCAAACTA GCCGCCTTCT TCCACAACCT TGGAGAACTA CCCATTCGCC GCCCCAATCG AGCCCCGCCC GCTGCCGTCA AAGACGGGCC GCGTACCAAT GATGAGATTC GCAATGCGCA GATCCAGCTG ATCGACGCCG AAGGCACCAA CCGTGGTGTC GTCGAGACCG TGGTCGCCAT CAAGATGGCC GCCGAAGCCG GCATGGATCT GGTCGAGATT TCGCCGAACA ACTCGCCGCC GGTCTGCAAG ATCATGGACT ACGGCAAGTA CAAATATTCG GCGCAGAAGA AGGCCGCCGA GGCCCGCAAG AAGCAGAAGG TCGTCGAGAT CAAGGAGATC AAGCTCCGTC CGATGATCGA TGACCACGAC TACGACGTGA AGATGCGGGC GATGCAGCGC TTCTTCGAAG AGGGCGACAA GGTCAAGATC ACGCTGCGCT ATCGCGGCCG CGAAATGGCG CACCAGGAGA TCGGCACCAA GCTGCTCGAC AAGGTGAAAT CCGACGTGGC GGCGTTCGCC AAGGTCGAGC AGGACGCCAA GTTCGAGGGC CGTCAGGTCG TCATGGTTCT GGCCCCGCGC TAG
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Protein sequence | MPAKAYSFKL AAFFHNLGEL PIRRPNRAPP AAVKDGPRTN DEIRNAQIQL IDAEGTNRGV VETVVAIKMA AEAGMDLVEI SPNNSPPVCK IMDYGKYKYS AQKKAAEARK KQKVVEIKEI KLRPMIDDHD YDVKMRAMQR FFEEGDKVKI TLRYRGREMA HQEIGTKLLD KVKSDVAAFA KVEQDAKFEG RQVVMVLAPR
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