Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0201 |
Symbol | nth |
ID | 5150410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 206429 |
End bp | 207253 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640555226 |
Product | DNA-(apurinic or apyrimidinic site) lyase / endonuclease III |
Protein accession | YP_001236404 |
Protein GI | 148251819 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0177] Predicted EndoIII-related endonuclease |
TIGRFAM ID | [TIGR01083] endonuclease III |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAAAA TCACCCGCCC CCAACGCGCC AAGCCGGCAC CGGTTCGCAG CCCCGCCAAA AAGGCCGCGA AAGCCGCGCC CAAGACAGCT CCGAAGACGG CCGCCAAGGC TCCGAAGACG GCGGCGAACG CGAAGACCGT GCCGAAGACC CCTGCCCGCG CGGTGAAGAA AGCGTTGAAG GCGGCCAAAC CCTGGACTCC CGCCGAGATC CGTGAGGCCT TCAGCCGCTT CGCGGCATCC AACCCGGAGC CGAAAGGCGA GCTCGAGCAT CTCAACCCCT ATACCTTGCT GGTCGCGGTG GTGCTCTCGG CGCAGGCCAC CGATGCTGGC GTCAACAAGG CGACGCGGCC GCTCTTCGCG GTCGCCGACA CGCCGCAGAA GATGATCGCG CTCGGCGAGG AGCAGTTGCG CGACTACATC AAGACCATCG GCCTCTACCG CACCAAGGCC AAGAACGTGA TCGCGCTGTC GCAGAAGCTG ATCAGCGAGT TCGGCGGCGA GGTGCCACGC ACGCGCGCTG AATTGGAGTC GCTGCCCGGC GCCGGACGCA AGACCGCGAA TGTCGTGCTC AACATGGCGT TCGGCGAGCA CACGATGGCG GTCGACACCC ATGTGTTCCG CGTCGGCAAC CGCACGGGGC TTGCGCCCGG CAAGACCCCG CTCGAGGTCG AGCTCGGGCT GGAGAAGGTG ATCCCGGCGG AGTTCATGCT GCATGCTCAT CACTGGTTGA TCCTGCACGG CCGCTACACG TGTCTGGCGC GCAAGCCGCG CTGCGAGTTG TGCCTGATCA AGGACCTGTG CCGCTGGCCG GAGAAGACCG CCTGA
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Protein sequence | MAKITRPQRA KPAPVRSPAK KAAKAAPKTA PKTAAKAPKT AANAKTVPKT PARAVKKALK AAKPWTPAEI REAFSRFAAS NPEPKGELEH LNPYTLLVAV VLSAQATDAG VNKATRPLFA VADTPQKMIA LGEEQLRDYI KTIGLYRTKA KNVIALSQKL ISEFGGEVPR TRAELESLPG AGRKTANVVL NMAFGEHTMA VDTHVFRVGN RTGLAPGKTP LEVELGLEKV IPAEFMLHAH HWLILHGRYT CLARKPRCEL CLIKDLCRWP EKTA
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