Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0163 |
Symbol | rho |
ID | 5149179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 166245 |
End bp | 167510 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640555188 |
Product | transcription termination factor Rho |
Protein accession | YP_001236366 |
Protein GI | 148251781 |
COG category | [K] Transcription |
COG ID | [COG1158] Transcription termination factor |
TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.386148 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGGAAA TCAAACTACA GGACCTCAAG TCAAAGACGC CGGCCGAGCT CGTCTCCTTC GCGGAGGAAA ACGGGGTCGA GAACGCCAGC ACGATGCGCA AGCAGGAGTT GATGTTTGCC ATTCTCAAAC AGCTTGCGAT TCAGGAAACG GACATCATCG GTGAAGGCGT CGTCGAGGTT CTCTCCGACG GCTTCGGCTT CCTGCGCTCG CCGGACGCCA ACTACCTTCC AGGCCCGGAT GACATCTATG TATCGCCGTC GCAGATCCGC CGCTTTGGCC TGCGCACCGG TGATACGATC GAAGGCCATA TCCGCAGCCC GAAGGAGGGC GAGCGCTATT TCGCGCTGCT GAAGGTCAAT ACGCTGAACT TCGAGGATCC CGAGAAGTCC AAGCACAAGG TCAATTTCGA CAATCTCACG CCGCTCTTCC CGGACGAGCG CTTCCGGCTC GAGCTTGAGG ATCCGACCCG CAAGGATCTG TCGCCGCGCG TCATCGACAT CGTCGCGCCG ATCGGCAAGG GTCAGCGCGC TTTGATCGTC GCTCCGCCGC GGACCGGCAA GACCGTGCTG ATGCAGAACA TCGCGCACTC GATCACGGCC AATCATCCCG AGTGCTACCT CATCGTGCTC CTGATCGACG AGCGTCCGGA GGAAGTCACG GATATGCAGC GCTCGGTCAA GGGCGAGGTC GTGTCGTCGA CCTTCGACGA ACCGGCCGCG CGTCACGTTC AGGTCGCGGA GATGGTGATC GAAAAGGCCA AGCGCCTAGT TGAGCATGGC CGCGACGTGG TCATTCTGCT GGACTCGATC ACCCGCCTCG GCCGCGCCTA CAACACCGTC GTGCCGTCCT CGGGCAAGGT GCTGACCGGC GGTGTCGACG CCAATGCGCT GCAGCGGCCG AAGCGCTTCT TCGGTGCGGC CCGCAACATC GAGGAGGGCG GCTCCTTGAC CATCATAGCG ACCGCGCTGG TCGATACCGG CAGCCGCATG GACGAGGTCA TCTTCGAAGA GTTCAAGGGC ACCGGCAACT CCGAGCTCAT CCTCGACCGC AAGGTCGCGG ACAAGCGGAC CTTCCCGGCG ATCGACATCG CGCGCTCCGG CACACGCAAA GAAGAGCTCA TCACCGAGCC GCAGAACCTC AAGAAGATGT ACGTGCTCCG CCGCATCCTC AATCCGATGG GCACCATGGA CGCGATCGAC TTCCTGCTCG ACAAGCTGCG CAGCACCAAG AGCAATGCGG AGTTCTTCGA GTCGATGAAC ACCTGA
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Protein sequence | MREIKLQDLK SKTPAELVSF AEENGVENAS TMRKQELMFA ILKQLAIQET DIIGEGVVEV LSDGFGFLRS PDANYLPGPD DIYVSPSQIR RFGLRTGDTI EGHIRSPKEG ERYFALLKVN TLNFEDPEKS KHKVNFDNLT PLFPDERFRL ELEDPTRKDL SPRVIDIVAP IGKGQRALIV APPRTGKTVL MQNIAHSITA NHPECYLIVL LIDERPEEVT DMQRSVKGEV VSSTFDEPAA RHVQVAEMVI EKAKRLVEHG RDVVILLDSI TRLGRAYNTV VPSSGKVLTG GVDANALQRP KRFFGAARNI EEGGSLTIIA TALVDTGSRM DEVIFEEFKG TGNSELILDR KVADKRTFPA IDIARSGTRK EELITEPQNL KKMYVLRRIL NPMGTMDAID FLLDKLRSTK SNAEFFESMN T
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