Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0142 |
Symbol | hisF |
ID | 5149740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 149733 |
End bp | 150509 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640555167 |
Product | imidazole glycerol phosphate synthase subunit HisF |
Protein accession | YP_001236345 |
Protein GI | 148251760 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0107] Imidazoleglycerol-phosphate synthase |
TIGRFAM ID | [TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAAGG TCCGTGTCAT TCCCTGCCTC GACGTCAAGG ACGGACGGGT CGTCAAGGGC GTCAACTTTG TCAATCTGCG CGATGCCGGC GATCCGGTGG AGGCCGCGAT CGCCTATGAC GCCGCCGGCG CCGACGAGCT CTGCTTCCTC GACATCACCG CCACCCATGA GAACCGCGGC ATCATGCTCG ACGTCGTCCG GCGCACGGCG GAGGCCTGCT TCATGCCGGT CACGGTTGGC GGCGGCGTGC GCACCATCGA CGACATCAAG ACCTTGCTGC GCTCCGGCGC CGACAAGGTC TCGATCAATT CGGCCGCCGT GGCGCGGCGC GAGTTCGTGA AGGAGGCCGC CGAGAAGTTC GGCGAGCAGT GCATTGTCGT GGCGATCGAC GCCAAGTCGG TGGCGCGGCC GGGCGGCGGC AGTCGGTGGG AGATCTTCAC CCATGGCGGG CGCAAATCGA CCGGCATCGA CGCGCTGGAA TATGCCCAGG AGGTGGTTTC GCTGGGGGCC GGCGAGATCC TGCTGACCTC GATGGATCGC GACGGCACGC GGCAGGGTTT TGATATTCCG TTGACGCGGG CGGTTGCCGA CAGCGTTCCG GTGCCGGTGA TCGCCTCGGG CGGCGTCGGC AATCTGGACC ATCTGGTCGA CGGCATCCGA CAGGGCCGGG CGACCGCGGT GCTGGCCGCC TCGATCTTCC ATTTCGGGGA ATTTACCATC CGGCAGGCCA AGGAGCACAT GGTGCGCCAG GGCCTGCCGA TGCGGCTCGA TCCCTGA
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Protein sequence | MFKVRVIPCL DVKDGRVVKG VNFVNLRDAG DPVEAAIAYD AAGADELCFL DITATHENRG IMLDVVRRTA EACFMPVTVG GGVRTIDDIK TLLRSGADKV SINSAAVARR EFVKEAAEKF GEQCIVVAID AKSVARPGGG SRWEIFTHGG RKSTGIDALE YAQEVVSLGA GEILLTSMDR DGTRQGFDIP LTRAVADSVP VPVIASGGVG NLDHLVDGIR QGRATAVLAA SIFHFGEFTI RQAKEHMVRQ GLPMRLDP
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