Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0102 |
Symbol | |
ID | 5149596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 106906 |
End bp | 107886 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640555129 |
Product | S49 family peptidase |
Protein accession | YP_001236308 |
Protein GI | 148251723 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCTTG ATTCGGATGT GATCGTCGAT CGCCGCAGGC TGCGCCGCAA ACTGACCTTC TGGCGCGTCG TCGCGGTGCT GATCGCGATC GCAGCGCTAT CCGCCATCGG TCTTGCGATG TCGCCGCGCG GCCGCACCGC GCTCTCGACG TCAGGCTCGA TCGCCCGCGT CAACATCGAA GGCCTGATCC GCAGCGACCA CGAGCGCGTC GAGGCGCTGG AGCGGCTGGA GAACTCATCG GCCGAGGCCG TGATCGTTCA CATCAATTCG CCGGGCGGAA CCACTGCCGG CTCCGAACAG CTCTACGATT CCCTGGTGCG GCTGAAGGCG AAGAAGCCGC TGGTCGTGGT CGTCGAAGGA CTCGCCGCGT CCGGCGGCTA TATCGGCGCG ATCGCCGCGG ACCACATCGT CGCGCAGCAG AGCTCGCTGG TCGGCTCGAT CGGCGTGCTG TTCCAATATC CGAATGTCAG CGAATTGTTG AAGACGATCG GCGTCAAGGT CGAAGAGGTG AAGTCCTCGC CGCTGAAGGC GGCGCCGAAC GGCTATGAAC CGACCAGCCC GGAAGCGCGC GCCGCGCTCG ACGCCCTGGT CAAGGATTCC TACGCCTGGT TCCGCGGCCT CGTGAAGGAT CGCCGCGGGA TGGATGACGC GCTGCTCGAG AAGGTGGCGG ACGGCCGCGT CTTCACCGGC CGGCAGGCGA TCGAACTCAA GCTGATCGAC GAACTCGGCG ACGAGAAGAC GGCAGTGGCC TGGCTCGTGG CCAACAAGAA CGTCAAGAAG GATCTGCCGG TGCGCGACTA CAAGCTCGTG CCGCGGTTCG GTGACTTGAC CTTCCTGCGC ACCGCGACCT CCCTGGTGCT CAATGCCGTC GGCCTGTCCG GGATCGCGCA TCAGATCGAG CAGGCCGGGG TCGTGCAGGC GGTCGACCGG CTGGGACTTG ACGGCATGCT CGCATTGTGG ACGCCGGCCG CGGGAAATTG A
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Protein sequence | MSLDSDVIVD RRRLRRKLTF WRVVAVLIAI AALSAIGLAM SPRGRTALST SGSIARVNIE GLIRSDHERV EALERLENSS AEAVIVHINS PGGTTAGSEQ LYDSLVRLKA KKPLVVVVEG LAASGGYIGA IAADHIVAQQ SSLVGSIGVL FQYPNVSELL KTIGVKVEEV KSSPLKAAPN GYEPTSPEAR AALDALVKDS YAWFRGLVKD RRGMDDALLE KVADGRVFTG RQAIELKLID ELGDEKTAVA WLVANKNVKK DLPVRDYKLV PRFGDLTFLR TATSLVLNAV GLSGIAHQIE QAGVVQAVDR LGLDGMLALW TPAAGN
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