Gene BBta_0079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0079 
Symbol 
ID5148850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp79992 
End bp80501 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content65% 
IMG OID640555107 
Producthypothetical protein 
Protein accessionYP_001236286 
Protein GI148251701 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.26747 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTCA GCGCGCCCGC ATTGAAGGCA TTCCTGCTTG CCACGCCGTT CTTCGGCGGC 
CTGTCGGATT CGAGCCTCGA TCTGCTGGTC GCGCGGCTGG TCGAGCGCCG GTTTGCGAGC
GGAGATACTA TCGTCGCTGA GGGCGAACCG GGACGCGCGA TGTTCGTCGT GCACAGCGGG
ACGCTGGGCG TCAGCGAGCG CCTGGACACC GGCGGCGTCA TCAGGATGTC GAGCCTCACG
CCCGGCGACT TCTTCGGTGA GATGACCTTG CTGGAAATGC AGAACAGGTC GGCCACGGTG
GTCGCGGAAA CGCCGACCGT GCTGTACGAG CTCACAGCGC GAGAGCTCTA TGCTTTCTAC
AAGGCCGACA TCCACGCTTA TGTGATCGTG ATGCAGAATA TCAATCGCGA GCTATGCCGC
CGGCTGCGTC GTGCGGACGC GCGCATCAAG GCGCTGGAGA TGCGGGAGGC GGGATCGCCG
TCGGTCCGCG GTGACGCCGG CCTGCTATAG
 
Protein sequence
MAVSAPALKA FLLATPFFGG LSDSSLDLLV ARLVERRFAS GDTIVAEGEP GRAMFVVHSG 
TLGVSERLDT GGVIRMSSLT PGDFFGEMTL LEMQNRSATV VAETPTVLYE LTARELYAFY
KADIHAYVIV MQNINRELCR RLRRADARIK ALEMREAGSP SVRGDAGLL