Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0075 |
Symbol | |
ID | 5156170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 75462 |
End bp | 76841 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640555103 |
Product | peptidoglycan binding domain-containing protein |
Protein accession | YP_001236282 |
Protein GI | 148251697 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.542735 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGACGGC TGGCCACGGC AACCTTCATC TGCGCGAGCG CGATCAGCGC ATGCGGACCG GCCCTGGCAC AGGCGACACC CGCGCCGGCG GCGCAGGGCG TGCTGCCGGG CGCCAAGCCC AAGCCCGTCG CGACCCAGCC GGTCCGGCCC GGCGTACAGG CGCCGGCCGA CACCGCCAAT GCAATGGGAC AGGCCGAACG GCTTGCGCTG CAATCCGATC TCGCCTGGGT CGGCCAGTAC AACGGCGCCA TCACCGGCGA CGTCAGCGAG CGCATGGTCA ATGCGATCAA GGAGTATCAG AAGCTCAAGG GCGGCAAGCC GACCGGCGTG CTCAATCCGC AGGAGCGCGC CGTGCTCGCC GACACCGCCC GCCGCAAGCA GGAGAGCGTC GGCTGGAAGC TCGTGACCGA ACCGGTCAGC GGCGCGCGCC TGGGCATTCC CACCAGGCTG GTGCCGCAGC AGAGCAGCGA CGGCACCGGC TCGAAATGGA GTTCGCCCAC CGGCACCGTG CAGGTCGTGC TGTCACGCCG CAAGGAGGCC AGCCCGACCA GTGCGGCGCT GGCCGACCGC GAGAAGAAGG AGCCCGGCCG CACCGTCGAC TACAGCGTCG TCAAGCCTGA CTTCTTCGTG CTCTCCGGCC TGCAGAACCT GAAGAAATTT TACATCCGCG GCACCTTCAA GGGCGACGAG GTCCGCATCC TGACCATCCT CTACGACCAG GCCACCGAGA ACACCGTCGA GCCGGTCGTG ATCGCGATGT CGAGCGCCTT CACCCCGTTC CCGGCGACGC AAGCCGCTGC GCCGGCACCG CGGCGGAGCG TCGACTACGG CACCGGAATC ATCGCGACCC AGGACGGCGC CATCATCACC GATCGCGAGG TCAGCGATGG CTGCGTGGCG CTCACCATCC CGGGGTTCGG CCATGCCGAG CGCGTGGCCG AGGACAAGGA ACGCGGGCTG GCGCTGCTGC GGATCTACGG CGCGCGCGGC CTGAAACCGC TGGCGCTGTC GGGCGGCAGC GCCAGATCAT CCATCGACAT CGTCGGCATC GCCGATCCGC AGAGCCAGGG CGGCGGCGCT GCGATCAGCA CCGTGAAGGC GCAACTCGCC GGCGTTGGCA GCGGCGATGC CGCGCTCGCG CCGGCGCCGG GCCTCGGCTT CTCCGGCGGC GCCGCATTGG ATGGCGACGG CCGTTTCGCC GGCATCACGC TGCTGAAGCC CGGCCTGCTC GCCGGCACGG CCATGATCCC GGCGACGCAG GCCGTAATGG TCAGCGCGGA GGCGACGCGC GCCTTTCTGA AGGCGCACGG GGTTACGCCT GACGGCACGT CGCTCGACGC CAAGGCCGCC ACTGTGCGGG TCATCTGCGT GCGCAAATAG
|
Protein sequence | MRRLATATFI CASAISACGP ALAQATPAPA AQGVLPGAKP KPVATQPVRP GVQAPADTAN AMGQAERLAL QSDLAWVGQY NGAITGDVSE RMVNAIKEYQ KLKGGKPTGV LNPQERAVLA DTARRKQESV GWKLVTEPVS GARLGIPTRL VPQQSSDGTG SKWSSPTGTV QVVLSRRKEA SPTSAALADR EKKEPGRTVD YSVVKPDFFV LSGLQNLKKF YIRGTFKGDE VRILTILYDQ ATENTVEPVV IAMSSAFTPF PATQAAAPAP RRSVDYGTGI IATQDGAIIT DREVSDGCVA LTIPGFGHAE RVAEDKERGL ALLRIYGARG LKPLALSGGS ARSSIDIVGI ADPQSQGGGA AISTVKAQLA GVGSGDAALA PAPGLGFSGG AALDGDGRFA GITLLKPGLL AGTAMIPATQ AVMVSAEATR AFLKAHGVTP DGTSLDAKAA TVRVICVRK
|
| |