Gene BBta_0056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0056 
Symbol 
ID5152433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp57920 
End bp58633 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content66% 
IMG OID640555086 
Producthypothetical protein 
Protein accessionYP_001236265 
Protein GI148251680 
COG category[K] Transcription 
COG ID[COG2740] Predicted nucleic-acid-binding protein implicated in transcription termination 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.955133 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGCTT TGGCTGACCC CGAGCTCGAC AATGGACCGC GGACCGAGAA GTCCGCGACC 
ATGCGCATGT GCGCGGTCAG CCGCGAGGTG CGGCCGATCG AGGAGCTGAT CCGCTTCGTG
GTCGGCCCGT CGGGCGAGGT CGTGCCCGAC ATCAAGCGCA AGCTGCCGGG ACGGGGATTG
TGGATCACGG CGTCAAAGCC GGTGGTTGCG GAAGCGGTGC GGCGTCACCA TTTCAGCCGG
GGCTTCAAGG CGAACGTCCG CGTCCCGCCG ACACTGGCCG ACGATCTGGA GGCCCTGCTG
GCCCGCAGCG CCATCGAGGC CCTGGGGATC GCTGCCAAGG CCGGTCAGGT CGTGTCCGGA
TTCTCCAAGG TGGAAGCGGC GCTGTCGCAG CGGCAATCCC GGACAGCATT GGCCGCCCTG
CTTCATGCCT CGGACGGCGC AGCCGATGGG ATTCGCAAGC TCGACGCCCT GGTGCGGTCG
AATGACGAGG ACCAGGGGCA AGCCCCGCCA TTTCCGATCA TCTGCTGCCT CACTTCGGCA
GAATTGGATT TGGCACTTGG GCGCTCAAAT GTGATACATG CTGCCGTGCT CGCAGGCCCG
GCGAGCAGGA CATTCCTGTC GCGCAGCCAG ACTCTGGTCC GATACCGGTC GGCCGACGCT
GACAAGATTG CCGGAACCGC GGCCACGAAA TCTGCTTCGA CTTCGAAGAC ATAG
 
Protein sequence
MLALADPELD NGPRTEKSAT MRMCAVSREV RPIEELIRFV VGPSGEVVPD IKRKLPGRGL 
WITASKPVVA EAVRRHHFSR GFKANVRVPP TLADDLEALL ARSAIEALGI AAKAGQVVSG
FSKVEAALSQ RQSRTALAAL LHASDGAADG IRKLDALVRS NDEDQGQAPP FPIICCLTSA
ELDLALGRSN VIHAAVLAGP ASRTFLSRSQ TLVRYRSADA DKIAGTAATK SASTSKT