Gene BBta_0054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0054 
Symbol 
ID5152431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp55461 
End bp56222 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content68% 
IMG OID640555084 
Producthypothetical protein 
Protein accessionYP_001236263 
Protein GI148251678 
COG category[S] Function unknown 
COG ID[COG0779] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.454767 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAC CCACGTTCGC AGCCGCTGAC ACCGATCTTC TGACCGAGCC CCGTCTCGTG 
GTCGAGCCGG GTGTCGCCGC GCGCGTGGCC GCGGTGGCCG AGCCGGTGCT GCAGGGAATG
GGTTACCGCC TGGTCCGGAT CCGCATCTCC GGCGAGGCCG GCTGCACCGT CCAGGTCATG
GCCGAACGTC CCGACGGCAC GATGCAGATC GAGGATTGCG AGGCGGTGTC GCGGGCGCTG
TCGCCGGTGC TGGACATCGC CGACCCGATC GATCGCGCCT ATCGGCTTGA GATCTCCTCG
CCGGGCATCG ACCGACCGCT GGTCCGCCGC ACCGATTTCG AGCGCCACAT CGGCCATCTC
GTCAAGATCG AGATGGCGGT GGCGCATCAG AACCGCAAAC GCTTCCGCGG CATCATCACC
GGGCTCGACG GCGACGGCGT GTGCATCACC CGCGACGACG TGGCGAAAGA CCAGGACCCG
AGCGTCGTGC TACCGATGAC CGACATCGGC GACGCCAAGC TGGTGCTGAC CGACGAGTTG
ATCGCCGAGT CGATGCGCCG CGGCAAGGCG GCCGAGCGCG AGAAGAAGCG CGACCTCGGG
CTTGCCCCGC CGCTGGCGCC GCACGCCAAG CCTGCGGCCC AGGCCAAGCC GAAACCGAAA
TTGAAAGACG GCCAGGCGGC GAAGAAGCCG CTGCCGACCA ACACCAAGAA ACATCGCCTC
GCCGCCGATC GTGCGCGCAG AGGCGAGATC GATCCTGATT AG
 
Protein sequence
MTEPTFAAAD TDLLTEPRLV VEPGVAARVA AVAEPVLQGM GYRLVRIRIS GEAGCTVQVM 
AERPDGTMQI EDCEAVSRAL SPVLDIADPI DRAYRLEISS PGIDRPLVRR TDFERHIGHL
VKIEMAVAHQ NRKRFRGIIT GLDGDGVCIT RDDVAKDQDP SVVLPMTDIG DAKLVLTDEL
IAESMRRGKA AEREKKRDLG LAPPLAPHAK PAAQAKPKPK LKDGQAAKKP LPTNTKKHRL
AADRARRGEI DPD