Gene BBta_0024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0024 
Symbol 
ID5149343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand- 
Start bp25872 
End bp26549 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content65% 
IMG OID640555055 
Producthypothetical protein 
Protein accessionYP_001236234 
Protein GI148251649 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.369937 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.267873 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTCG ACGACGTCAT CCTCGGCCGC CGCAGTATTC GTGGCTACAA GCCCGATCCC 
GTGCCACGGG CGCTGATCGA GGAGATCCTC ACGCTGGCGA TGCGCGCGCC GTCGTCGATG 
AACACCCAGC CGTGGAATTT CTACGTCATC ACCGGCGAGC CGCTCAACCG CATCCGTGCC 
GGCAACACCG AGCGCATGCT GGCGGGCGTG CCCCAGTCGC GCGAGTTTCG CATCGGCGAG 
CCGTTTGCCG GTCAGCACCG CGAGCGTCAG ATTGGCGTCG CCAAGCAATT GTTTTCCGCC 
ATGGGCATCG CACGCGACGA CAAGGAGAAG CGTCAGGACT GGGTGCTGCG TGGCTTCCGC 
CAATTCGATG CGCCGGTCTG CATCATCGTC ACCTACGACC GCGTGCTCGC CGGCAGCGAC 
GACACGCCGT TTGATTGCGG TGCCGTCACC ACGGCGCTGG TCAATGCCGC CTGGTCCCGC 
GGCCTCGGCG CGGTCATCAA CAGCCAGGGC ATCATGCAGT CGCCGGTCGT CCGCGAGCAC 
GCCGGCATCG CCGACGACCA GGTCATCATG AAGAGCATCG CGCTCGGCTG GCCGGATCAT 
GATTTCCCCG CCAATGCCGT GGTGTCGGAG CGGAAGTCGG TGAAAGAGGC GACCGTGTTT 
GTGGGGTTTG ACGATTAG
 
Protein sequence
MEFDDVILGR RSIRGYKPDP VPRALIEEIL TLAMRAPSSM NTQPWNFYVI TGEPLNRIRA 
GNTERMLAGV PQSREFRIGE PFAGQHRERQ IGVAKQLFSA MGIARDDKEK RQDWVLRGFR 
QFDAPVCIIV TYDRVLAGSD DTPFDCGAVT TALVNAAWSR GLGAVINSQG IMQSPVVREH 
AGIADDQVIM KSIALGWPDH DFPANAVVSE RKSVKEATVF VGFDD