Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0008 |
Symbol | gyrB |
ID | 5156080 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 8418 |
End bp | 10856 |
Gene Length | 2439 bp |
Protein Length | 812 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640555040 |
Product | DNA gyrase subunit B |
Protein accession | YP_001236219 |
Protein GI | 148251634 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAAC CCGCCCGGCA AACCATCGCC GACAACGAGC CTGCAACCGC GAACGACTAT GGCGCTGAAT CGATCCGGGT GTTGAAGGGC CTGGATGCCG TGCGCAAGCG CCCGGGCATG TATATCGGCG ACACCGATGA CGGCTCCGGC CTGCACCACA TGGTCTACGA GGTCGTCGAC AATGCGATCG ACGAAGCACT CGCCGGCTAT GCGAGCCGCG TCGAGGTGGT GCTCAACGCC GACAATTCCG TCACGGTGCG CGATGACGGC CGCGGCATTC CGGTCGACAT CCACAAGGGT GAAGGCGTGT CGGCAGCCGA GGTCATCATG ACCCAGCTGC ATGCCGGCGG TAAGTTCGAC CAGAACTCCT ACAAGGTTTC CGGCGGTCTG CACGGCGTTG GCGTCTCCGT CGTCAACGCG CTGTCGAGCA AGCTGCAGCT GCGGATCTGG CGCGAGGACA AGGAGCACCT GATCGAGTTC GCCCATGGCG ATGCCGTAGC GCCGCTCAAG GTGGTCGGCG AGGCACAGGG CCGGCGCGGT ACCGAGGTGA CGTTCCTCGC CTCGACCGAA ACCTTCAAGA TGGTCGAATA CGACTACGCG ACGCTCGAGC ATCGCCTGCG CGAGCTCGCC TTCCTCAACT CCGGCGTCCA CATCGTGCTC TCCGACATGC GCCACGCGGT CGAGAAGCGC GAGGAGATGT TCTATTCCGG CGGCGTCGAG GAGTTCGTCA GATATCTCGA CCGCAACAAG AAGGCGATCG TGCCGTCCCC GATCATGGTC CGCTCGGAGG TCAACGGCAT CACCGTCGAG GCGGCGCTGT GGTGGAACGA CAGCTATCAT GAGAACGTGC TGTGCTTCAC CAACAACATC CCGCAGCGTG ACGGCGGCAC CCATCTCGCC GGCTTCCGCG GCGCGCTGAC GCGCCAGGTC AACGGCTACG CGGATGCCCA CGCCAAGAAG GAAAAGATCG CGCTGACCGG CGACGACTGC CGCGAGGGGC TGACCGCCGT TCTGTCCGTG AAGGTGCCAG ATCCGAAGTT CTCGTCGCAG ACCAAGGACA AGCTGGTGTC CTCGGAGGTG CGCCCGGTCG TCGAGAACGT CATCAACGAA GCGCTGTCGG CGTGGTTCGA GGAGCATCCG TCCGAGGCCA AGACCGTCGT CGGCAAGGTG ATCCAGGCCG CCGCCGCTCG CGAGGCGGCG CGCAAGGCGC GCGAACTGAC GCGCAAGAAT CCGCTCAACA ACATCGCCTC GCTGCCGGGC AAGCTCGCCG ACTGTCAGGA AAAGGATCCG GCCAAGTCCG AGCTGTTCAT CGTCGAGGGT GACTCGGCCG GCGGAAGCGC CAAGCAGGGC CGCAACCGCG AGTTCCAGGC CGTGCTGCCG CTGCGCGGCA AGATCCTCAA TGTCGAACGC GTGCGTCCGG ACAAGATGTT GTCCAGCGAG CAGATCGGCA CCTTGATCAC GGCGCTCGGC ACTGGCATCA GCGACGACTT CTCGATCGAC AAGCTGCGCT ATCACAAGAT CATCGTGATG ACCGACGCCG ACGTCGACGG CGCCCACATC CGCACCTTGC TGCTGACGTT CTTCTACCGA CAGATGCGCC AGATCATCGA TCGCGGCCAT CTCTACATCG CGCAGCCGCC GCTCTACAAA GTGACGCGCG GCAAGTCCGA GCAGTATCTA AAGGACGAGC GCGCGCTGGA GGATTATCTG ATCGGCACCG GCCTCGACGA CTGCGTGTTC AAGAGCGCGG AGGGCGAGGA ACGCAAGGGG CGCGACCTCC TGGCGCTCGT CGAAGAGGCG CGCATCGTCC GCAACATCCT GCGCAACCTG CACAGCCGCT ACGACCGCAC GGTCGTCGAG CAGGCCGCGA TCGCTGGCGT GCTGCGCGCG GACATTACCC GTGACATCGC CACTGCCGAT GCCGCGGCGG AGTACATCGC CAAGCGGCTC GACGTGCTCG CCGACGAGGT CGAACGCGGC TGGATCGGTC ACTTCGTCGA AGGCCAGGGT TTCACCTTCG AGCGCACCGT GCGCGGCGTC AAGGACGTCG CCGTGATCGA CGATGCCCTG CTTGCCTCTG CCGATGCGCG CAAGCTCGAC GACTACGCGG CGCGCCTGCA GGAGGCCTAT GCCAAGCCCG GCTTCCTGCG CCGCGGCGAC GCACCGACCG TGATCCACGG CCCGATCGAC CTGTTCGAGG CCGTCACCGA TGCCGGCCGC AAGGGCATCG CCATGCAGCG CTACAAAGGG CTGGGCGAGA TGAATCCGCA GCAGCTCTGG GAAACCACGC TCGATACCGA GGCGCGCACG CTGCTGCAGG TGAAGGTCAA GGAGGTCGAC GAGGCCGACG ACATCTTCAC CAAGCTGATG GGCGACGTCG TCGAGCCGCG CCGCGAATTC ATCCAGGACA ATTCGCTGTC GGCGAATGTA GACGTGTAG
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Protein sequence | MTEPARQTIA DNEPATANDY GAESIRVLKG LDAVRKRPGM YIGDTDDGSG LHHMVYEVVD NAIDEALAGY ASRVEVVLNA DNSVTVRDDG RGIPVDIHKG EGVSAAEVIM TQLHAGGKFD QNSYKVSGGL HGVGVSVVNA LSSKLQLRIW REDKEHLIEF AHGDAVAPLK VVGEAQGRRG TEVTFLASTE TFKMVEYDYA TLEHRLRELA FLNSGVHIVL SDMRHAVEKR EEMFYSGGVE EFVRYLDRNK KAIVPSPIMV RSEVNGITVE AALWWNDSYH ENVLCFTNNI PQRDGGTHLA GFRGALTRQV NGYADAHAKK EKIALTGDDC REGLTAVLSV KVPDPKFSSQ TKDKLVSSEV RPVVENVINE ALSAWFEEHP SEAKTVVGKV IQAAAAREAA RKARELTRKN PLNNIASLPG KLADCQEKDP AKSELFIVEG DSAGGSAKQG RNREFQAVLP LRGKILNVER VRPDKMLSSE QIGTLITALG TGISDDFSID KLRYHKIIVM TDADVDGAHI RTLLLTFFYR QMRQIIDRGH LYIAQPPLYK VTRGKSEQYL KDERALEDYL IGTGLDDCVF KSAEGEERKG RDLLALVEEA RIVRNILRNL HSRYDRTVVE QAAIAGVLRA DITRDIATAD AAAEYIAKRL DVLADEVERG WIGHFVEGQG FTFERTVRGV KDVAVIDDAL LASADARKLD DYAARLQEAY AKPGFLRRGD APTVIHGPID LFEAVTDAGR KGIAMQRYKG LGEMNPQQLW ETTLDTEART LLQVKVKEVD EADDIFTKLM GDVVEPRREF IQDNSLSANV DV
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