Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BAS5060 |
Symbol | speE |
ID | 2850560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus anthracis str. Sterne |
Kingdom | Bacteria |
Replicon accession | NC_005945 |
Strand | + |
Start bp | 4935331 |
End bp | 4936413 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637508315 |
Product | spermidine synthase |
Protein accession | YP_031299 |
Protein GI | 49188046 |
COG category | [R] General function prediction only |
COG ID | [COG4262] Predicted spermidine synthase with an N-terminal membrane domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAAAAC ATAGAAAACA AAGCAAAATA AAGATTTATA GAATAACAAA CTATAAAAAA GACAAGCGTT CTGAATTAGA CTCTAACAAA TTTGAACTAG AACAGCAGGC GGTAGAAAAT AAGCAGGACA AGCAGGGCAA ACAAGATAAT CAAGTACAAT CGGAAAATGT AGTCATAGTA CCCACAGATT CACACAACTT AGATATATGG GATGAAATTT CTCTAAAGGA AATACAAGCT GGTGAACATA CAAATTTATT TGCGGAACAA AGTAATTATC AAAATATTAA TTTGTTGCAA GTTAGCGATA TCCGTTTATA TTTGGACAAG CAACTACAAT TCAGTTCCGT CGATGAGCAA ATTTATCATG AAGCACTTGT GCATCCAATT ATGTCAAAAG TAATTGATCC AAAACGTGTT CTCATATTAG GCGGTGGCGA TGGCCTTGCC CTGCGAGAAG TTTTAAAATA TGAAACTGTA CTACATGTAG ACCTTGTTGA CTTAGATGGA TCGATGATTG ATATGGCTCG TAATGTTCCT GAATTAGTTT CTTTAAACAA AAGTGCATTT TTTGATAATC GTGTAAATAC ACACGTATGT GATGCAAAAG AATTTTTAAG CTCTCCTTCC TCTTTATACG ATGTAATCAT TATTGATTTT CCAGATCCAG CGACAGAGTT GTTAAGTACT TTATATACAA GCGAACTTTT TGCTCGTATA GCTACATTTT TAACAGAAGA CGGCGCGTTC GTCTGCCAAT CTAATTCACC TGCTGATGCA CCTCTAGTAT ATTGGAGTAT CGGTAACACA ATTGAACATG CGGGATTAAC TGTGAAAAGT TATCATACAA TCGTTCCTTC TTTCGGAACT GACTGGGGAT TTCATATCGC TGCTAATTCT GTCTATGTAC TCGATCAAAT TGAGCAATTA TACGTAGTAC CAACTCCTCG AACATTACCT TCCCTTCTTT TTCCTTTATT TCAATTTAAA GAAGAACATT TAGAACAACG TAATTTCGCT CTCCTAAACT CAGAATCGAA CCTTATCCTA CACCAATGTT ACAAAAAGGA AATGGAGTTT TGA
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Protein sequence | MPKHRKQSKI KIYRITNYKK DKRSELDSNK FELEQQAVEN KQDKQGKQDN QVQSENVVIV PTDSHNLDIW DEISLKEIQA GEHTNLFAEQ SNYQNINLLQ VSDIRLYLDK QLQFSSVDEQ IYHEALVHPI MSKVIDPKRV LILGGGDGLA LREVLKYETV LHVDLVDLDG SMIDMARNVP ELVSLNKSAF FDNRVNTHVC DAKEFLSSPS SLYDVIIIDF PDPATELLST LYTSELFARI ATFLTEDGAF VCQSNSPADA PLVYWSIGNT IEHAGLTVKS YHTIVPSFGT DWGFHIAANS VYVLDQIEQL YVVPTPRTLP SLLFPLFQFK EEHLEQRNFA LLNSESNLIL HQCYKKEMEF
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