Gene BARBAKC583_1346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBARBAKC583_1346 
SymbolgyrB 
ID4684252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBartonella bacilliformis KC583 
KingdomBacteria 
Replicon accessionNC_008783 
Strand
Start bp1406996 
End bp1409425 
Gene Length2430 bp 
Protein Length809 aa 
Translation table11 
GC content41% 
IMG OID639842504 
ProductDNA gyrase subunit B 
Protein accessionYP_989593 
Protein GI121601805 
COG category[L] Replication, recombination and repair 
COG ID[COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit 
TIGRFAM ID[TIGR01059] DNA gyrase, B subunit 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGATG AAACAACCTC ACCGACATCT GGTGACTATG GTGCCGCTTC TATCAAGGTT 
CTCAAAGGTC TTGATGCTGT CCGTAAACGT CCTGGTATGT ACATCGGTGA TACCGACGAC
GGTTCAGGCT TACACCATAT GGTTTATGAA GTCGTCGACA ACGCTATTGA TGAAGCATTA
GCTGGCTACG CAACTCTTGT AAATGTTACG CTCCATGCCG ATGGATCCTG TTCTGTTTGT
GATAATGGAC GTGGAATTCC AACTGATATT CACCCAACAG AACATGTATC AGCTGCTGAA
GTGATCATGA CGCAACTTCA TGCTGGTGGA AAATTTGATC AAAATTCTTA TAAAGTTTCA
GGGGGATTAC ACGGCGTTGG TGTCTCTGTT GTTAATGCAC TATCGGTTTG GTTGCGCCTT
CGAATCAAGC GTGATGGTAA AATCCATGAA ATGTCGTTTA CTCATGGAGT GGCTGATGCT
CCGCTCAAAG TCGTTGGTCA ATGCGGTACA GAAAGTGGCA CAGAAATCAG CTTTTTACCA
AGCCCCGAAA CCTTCACCAT GGTTAAATTT GATTTCGAAA CATTAGAGCG TCGTCTTAGA
GAATTAGCTT TTTTGAATTC TGGTGTACAC ATTCTTCTTG TTAACCAACA CCATGCTGAT
GTTCGATCAG TAGAATTATA TTACGAAGGT GGATTAATTG AATTTATCAA ATATATTGAC
CAATCAAAAA AACCCTTAAT TGATGCACCG ATTTACATCA CAAGCGAAAA AGATGGGATC
AGTGTAGATG TTGCTTTATG GTGGAACGAT TCTTATCATG AGAAAGTATT GTGTTTCACC
AATAATATTC CTCAACGCGA TGGAGGAACC CATTTAGCGG GATTCCGCAG CGCCTTAACA
CGTCAAATTA ACGGTTATGC TGAATCCTCA GGCATTGCAA AAAAAGAAAA AGTTAATTTA
ACTGGCGATG ATTGCCGTGA AGGACTCACA GCCATTCTTT CCGTTAAAGT TCCCGATCCA
AAATTTTCTT CACAGACAAA GGATAAATTG GTTTCTTCTG AAGTCCGTCC AATTGTTGAA
AATTTGGTAA ATGAAGGACT TTCAGCATGG CTAGAAGAAC ACCCTAATGA AGCAAAAATT
CTCATTAGCA AAGTTGTAGA AGCTGCTGCA GCGCGCGAAG CAGCACGCAA AGCGCGTGAA
CTTACACGGC GAAAAGGAGC TCTCGATATC ACTTCTTTAC CAGGTAAACT TGCTGATTGT
CAGGAACGTG ATCCTACAAA ATCAGAAATT TTTATCGTCG AGGGGGATTC AGCTGGTGGT
TCAGCTAAAA GCGGACGTTC ACGCCAAAAT CAAGCAATTT TGCCTTTACG CGGTAAAATT
CTTAATGTCG AACGAGCACG TTTCGACCGA ATGCTTTCAT CCGAAATGAT TGGTACGCTT
ATTACTGCCC TTGGAACCTC TATTGGTAAG GATGAATTTT CACCTGATAA ATTGCGTTAT
CACAAAATCA TCATTATGAC AGATGCAGAT GTTGATGGCG CTCATATTCG CACCTTGCTT
CTCACTTTCT TTTTCAGACA AATGCCTGAA TTAATTGAAC GTGGTCATCT TTATATCGCG
CAACCACCTC TTTATAAAGT ATCACGTGGT AAATCCTCTC AGTACATTAA AAATGAAGCA
GCATTTGAAG ATTTCTTAAT TGATAGTGGT TTGGAAGAAA CAACATTAGA ATTATCAAGT
GGTGAGGTTT GTGCAGGCAT TGATTTACGC CAATTCGTCC AAGATGCCCG TTTGTTGCGC
CAACTCTTAA ACGGTCTCCA TACCCGCTAT GACCGCAATA TTGTTGAGCA AGCAGCAATC
GCTGGTGCTT TCAATTTTGA GGCTTTTGCA ACACCAGAAA CAGCACAAAA AATAGCGGAT
ACGATAGCAA AACGTCTTGA TTTAATTGCT GATGATATGG AACGTGGTTG GAGCGGTCAA
TATACATCAG ATGGAAGTTT ATGCTTTGAA CGCGTTTTGC GCGGAGTTAA AGATGTTATT
ACTCTTGATG CAGGGTTTAT AAATTCAGCA GATGCACGCC AAATTGGTCA TATTGCCAAA
AATCTCAAAG ACATCTATCG TGATCCTCCT CTTTTGCGTC GCAAAGATAA GTCAGAACGC
ATTTTTGGTC CTACGAGTTT ATTGGAAAGT ATTTTTATAA ACGGTAAAAA AGGTATTACT
TTACAGCGTT ACAAAGGCCT TGGAGAAATG AATGCTGATC AGCTTTGGGA AACAACTCTT
GATCCTGATG CGCGTTCTCT TTTACAAGTT AAAATCAATG ACGCAACTGA TGCAGATTCT
CTCTTCTCCC AGTTAATGGG TGATGAAGTT GAACCACGGC GAATTTTTAT TCAAAAAAAT
GCCCTAAACG TTGCTAATCT TGATATCTAA
 
Protein sequence
MSDETTSPTS GDYGAASIKV LKGLDAVRKR PGMYIGDTDD GSGLHHMVYE VVDNAIDEAL 
AGYATLVNVT LHADGSCSVC DNGRGIPTDI HPTEHVSAAE VIMTQLHAGG KFDQNSYKVS
GGLHGVGVSV VNALSVWLRL RIKRDGKIHE MSFTHGVADA PLKVVGQCGT ESGTEISFLP
SPETFTMVKF DFETLERRLR ELAFLNSGVH ILLVNQHHAD VRSVELYYEG GLIEFIKYID
QSKKPLIDAP IYITSEKDGI SVDVALWWND SYHEKVLCFT NNIPQRDGGT HLAGFRSALT
RQINGYAESS GIAKKEKVNL TGDDCREGLT AILSVKVPDP KFSSQTKDKL VSSEVRPIVE
NLVNEGLSAW LEEHPNEAKI LISKVVEAAA AREAARKARE LTRRKGALDI TSLPGKLADC
QERDPTKSEI FIVEGDSAGG SAKSGRSRQN QAILPLRGKI LNVERARFDR MLSSEMIGTL
ITALGTSIGK DEFSPDKLRY HKIIIMTDAD VDGAHIRTLL LTFFFRQMPE LIERGHLYIA
QPPLYKVSRG KSSQYIKNEA AFEDFLIDSG LEETTLELSS GEVCAGIDLR QFVQDARLLR
QLLNGLHTRY DRNIVEQAAI AGAFNFEAFA TPETAQKIAD TIAKRLDLIA DDMERGWSGQ
YTSDGSLCFE RVLRGVKDVI TLDAGFINSA DARQIGHIAK NLKDIYRDPP LLRRKDKSER
IFGPTSLLES IFINGKKGIT LQRYKGLGEM NADQLWETTL DPDARSLLQV KINDATDADS
LFSQLMGDEV EPRRIFIQKN ALNVANLDI