Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BARBAKC583_0983 |
Symbol | lpcC |
ID | 4684218 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bartonella bacilliformis KC583 |
Kingdom | Bacteria |
Replicon accession | NC_008783 |
Strand | - |
Start bp | 1020472 |
End bp | 1021530 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639842162 |
Product | lipopolysaccharide core biosynthesis mannosyltransferase lpcC |
Protein accession | YP_989262 |
Protein GI | 121602596 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 0.327737 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATGTTT CTCTAAAAGA AACTGATATT ATTGTTCCTC ACTTTAAAAA GCGTTTATCA GGGATAAAGT CGACAGTTAT TCAGCTTATT CCTTTGCAAC GAAAACAGGG TATACGGATA TCCTCTTTTG GGGTAGGTTT ACCAAAAAAT TTACCCACTC TTCGTGTGAG AGATATTTTC GGGCTTTGGA AAAGTCCAGC AGGAAAATCA TTTCGTGTAT GGCATGCACG GCGTAATATA GAGATGCTTG TTGGAGTTTT CCTACGGGAT GTTTTGCGCA TGAAGCTTAG GCTTGTCTTT ACATCCGCCT CTGAGCGTCA TCATAAATTT TCTACAAGAT GGTTGATACG TCGCATGGAT GAAGTTATCG CCGTCAGTTC ACGTGTTGGA ACTTATCTAA ATGTTCCCTA TACAGTTATC AAACATGGGG TAAATCTTGA GAATTTTTCA CCCCCAAAAA CTGCTTATGA TTATTTTTCA GCGACTGGTT TACCAGGTAA GTATGCGGTA GGATGTTTTG GACGTATCCG CTATTTGAAG GGTACTGATT TGTTTGTGGA TGCAATGTTA GCATTACTAC CACGCTATCC TGATTGGACA GCGATTATTG CTGGTCGTAC AACGATGCAA CACTGTGATT TTGAAAAAGA ATTACGTCGA AAGATTGCCG CTGCTGGTTT AAATGATCGC ATTATTATGC TGGGTGAAAT ATTGGATACG CCTCTGTGGT ATCGTCGTAT GTCACTTTAT GTGGCGCCTT CACGCACAGA GGGTTTTGGT TTGACACCCT TGGAGGCAAT GGCATCACAA ACAGCTGTAG TAACCAGTGA TGCAGGTATT TATGAAAAAT TGATTGTAGA GGGAACAGGG ACTGTTGTTA AAGAATTGAA CGCGTTGGCT TTCACGGAAG CCATTGAACC TTATTTTGCT GATTTAGATA AAACATTTGC AACAGAGCAA AGAGCTTTAG CTCACGTTCG TACTCATTTT CCTTTAGAAA AAGAAGCAGC TGAAATTGGT GCTGTTTATG AAAAAATATT TGCTGCAAAA ATGTTTTAA
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Protein sequence | MHVSLKETDI IVPHFKKRLS GIKSTVIQLI PLQRKQGIRI SSFGVGLPKN LPTLRVRDIF GLWKSPAGKS FRVWHARRNI EMLVGVFLRD VLRMKLRLVF TSASERHHKF STRWLIRRMD EVIAVSSRVG TYLNVPYTVI KHGVNLENFS PPKTAYDYFS ATGLPGKYAV GCFGRIRYLK GTDLFVDAML ALLPRYPDWT AIIAGRTTMQ HCDFEKELRR KIAAAGLNDR IIMLGEILDT PLWYRRMSLY VAPSRTEGFG LTPLEAMASQ TAVVTSDAGI YEKLIVEGTG TVVKELNALA FTEAIEPYFA DLDKTFATEQ RALAHVRTHF PLEKEAAEIG AVYEKIFAAK MF
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