| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BARBAKC583_0580 |
|---|
| Symbol | clpA |
|---|
| ID | 4684998 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bartonella bacilliformis KC583 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008783 |
|---|
| Strand | + |
|---|
| Start bp | 591904 |
|---|
| End bp | 594270 |
|---|
| Gene Length | 2367 bp |
|---|
| Protein Length | 788 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 639841768 |
|---|
| Product | ATP-dependent Clp protease ATP-binding subunit ClpA |
|---|
| Protein accession | YP_988888 |
|---|
| Protein GI | 121602591 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
|---|
| TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 0.118524 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTCTT TTACACCCAG TCTTGAAGAG GTTTTACATC GTGCATTAAC GATTGCTACT
CAAGCGCAGC ATGAATATGC TACATTAGAA CATCTTCTAC TTGCTTTGTT GGATGATGCT
GATGCAAGTT CAGTTATTTG CGCTTGTCAG GTAAATGTAG AAGAATTACG GGAGCGCTTG
ATCAGTTATA TTCAGTCAGA ATTAGATGCA CAAATTAGAG CAGACCAGGA TACAAAACCA
ACGGTGTTTT TTCAGCGTGT TATTCAACGT GCAGTGATTC ATGCGCAATC AGCAGGAAAA
GATGAAGTTT CAGGAGCAAA TGTTCTTGTT GCAATTTTTT CTGAACGTGA AAGTCATGCA
GCGTATTTTC TTCAAGAGAT AGGCATGACA CGTTATGATG CTGTACGTTT TATTTCACAT
GGTATTGTTC GTGATGATGG GTTGTCTCTT CTGCTTGAAG ATCTTGAAGA ACATCTAGAC
CAACAGGATT TAGAAAATAA CGAAAAAGTA CCAAGCGTAC TTTCTACTTA TTGCGTAAAT
TTGAATTGCA AAGCACGCAG TGGGAACATT GACTCATTAA TTGGCCGTGA CACAGAAGTT
TCACGAATGA TTCAAATTTT GTGTCGGAGA TCAAAAAATA ATCCGCTTTT GGTTGGTGAC
CCTGGTGTTG GAAAAACGGC TATCGTTGAA GGGCTGGCTA AACGTATTGT TGATGGACAA
GTTCCTGAAG TTTTGTCAAA TGCAACAATA TTTTCTCTTG ATATAGGAGG GTTGCTTTCT
GGAACACGCT ATCGTGGTGA TTTTGAAGAG CGGTTGAAGC AAGTTGTTCG AGAGCTTGAA
CAATATCCAG ACGCTGTTTT ATTTATTGAT GAAATTCATA CATTGATTGG AGCAGGGGCT
ACATCAGGGG GCAATATGGA TGCAGCAAAT CTTTTAAAAC CTGGGTTATC TTCAGGTAAT
ATTCGGTGTA TTGGATCAAC GACTTATAGG GAATATCGTA AAATTTTTGA ACAAGATCGA
GCTTTGGAAC GTCGTTTTCA GAAAATTGAT GTTAATGAGC CATCTGTTGC TGATGCAATT
AAGATTTTGC AAGGATTGAA ACCTTATTTT GAGGATTTTC ATCAAATTAA ATATACTGAT
GAGGCGATGA GGGCATCCGT AGAATTATCC TCACGTTATA TAGCGGATCG TCGGTTACCA
GATAAAGCGA TTGATGTTGT CGATGAAAGT GGTGCGGCAC AGATGCTTTT ACCGAAGAAG
CAGAGAAAAA AGAGTATAGG CGTCAAAGAA ATTGAATCTA TCATTGCGGC TATAGCAAGA
GTTCCATCAA AAACAGTTTC TAGAGATGAG AGGAAATTGC TTAGTAATCT TGAAAAAGAG
CTGAAACATG TCATTTATGG ACAGGATCAA GCAATTACAG CATTAGTATC ATCAATTAAA
TTAGCACGAG CAGGATTGCG TGAACCAGAA AAGCCAATAG GGAATTACTT ATTTTCAGGT
CCAACAGGTG TTGGAAAAAC TGAAGTTGCA AAGCAACTCG CATCTTCTTT AGGTATTGAA
CTTTTACGTT TTGATATGTC AGAATATATG GAGAGGCATA CGGTTGCACG TTTGATAGGA
GCTCCTCCAG GTTATGTAGG ATTTGATCAA GGTGGTCTTC TTACAGATGC GGTTGATCAA
AAGCCTCATG CCGTTGTGTT GTTAGATGAA ATTGAAAAAG CTCATCCAGA GTTATTTAGT
ATTTTATTGC AAGTGATGGA TTACGGAAAA TTAACAGACA ATAACGGAAA AAAAATTGAT
TTTCGCAATA TCATTTTGAT TATGACAACC AATGCTGGCG CTGCGGATAT GGAAAAATCA
GCGATTGGGT TTGGTTCGGT GCATCGCGAT GGTGATGATA TAGAGGCTAT TAATCGATTA
TTTACGCCAG AATTTCGTAA TCGGTTGGAC GCAGTTATTC CGTTTACACC TCTATCTCAG
TTAGTCATTA ATCAAATTGT GCAGAAGTTT ATTTTTCAAC TTGAGGCGCA ATTGGTTGAT
CGAGGGGTTA CCTTTGAACT CAGTACTTCT GCGATGATGT GGCTTGCTAA TAAAGGGTAC
AACGCTCAAA TGGGCGCACG TCCATTGAGT CGTGTCATAC AAGAGCATAT TAAGAAGCCA
TTAGCTGATG AAATTTTATT CGGAAAATTG CGCAATGGTG GCATGGTTCG TATATTCACA
AACAAGATAA ATGAAGGGAG AGAGACACTG CAGCTAGAAA TTTTACCTTC TATATGCTCA
AAAAAAAGTC GCAAAGCCAT TAAAACTTCA TTAGGGGCTA TAAAACAACG TATAAGCAAA
AAAGCTCTGC AATATAAAAT ATCCTAA
|
|---|
| Protein sequence | MPSFTPSLEE VLHRALTIAT QAQHEYATLE HLLLALLDDA DASSVICACQ VNVEELRERL
ISYIQSELDA QIRADQDTKP TVFFQRVIQR AVIHAQSAGK DEVSGANVLV AIFSERESHA
AYFLQEIGMT RYDAVRFISH GIVRDDGLSL LLEDLEEHLD QQDLENNEKV PSVLSTYCVN
LNCKARSGNI DSLIGRDTEV SRMIQILCRR SKNNPLLVGD PGVGKTAIVE GLAKRIVDGQ
VPEVLSNATI FSLDIGGLLS GTRYRGDFEE RLKQVVRELE QYPDAVLFID EIHTLIGAGA
TSGGNMDAAN LLKPGLSSGN IRCIGSTTYR EYRKIFEQDR ALERRFQKID VNEPSVADAI
KILQGLKPYF EDFHQIKYTD EAMRASVELS SRYIADRRLP DKAIDVVDES GAAQMLLPKK
QRKKSIGVKE IESIIAAIAR VPSKTVSRDE RKLLSNLEKE LKHVIYGQDQ AITALVSSIK
LARAGLREPE KPIGNYLFSG PTGVGKTEVA KQLASSLGIE LLRFDMSEYM ERHTVARLIG
APPGYVGFDQ GGLLTDAVDQ KPHAVVLLDE IEKAHPELFS ILLQVMDYGK LTDNNGKKID
FRNIILIMTT NAGAADMEKS AIGFGSVHRD GDDIEAINRL FTPEFRNRLD AVIPFTPLSQ
LVINQIVQKF IFQLEAQLVD RGVTFELSTS AMMWLANKGY NAQMGARPLS RVIQEHIKKP
LADEILFGKL RNGGMVRIFT NKINEGRETL QLEILPSICS KKSRKAIKTS LGAIKQRISK
KALQYKIS
|
|---|
| |