Gene BARBAKC583_0465 details

Gene Information

• Locus tag: BARBAKC583_0465
• Symbol: smpB
• ID: 4685131
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bartonella bacilliformis KC583
• Kingdom: Bacteria
• Replicon accession: NC_008783
• Strand: +
• Start bp: 470876
• End bp: 471352
• Gene Length: 477 bp
• Protein Length: 158 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 639841657
• Product: SsrA-binding protein
• Protein accession: YP_988781
• Protein GI: 121601796
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 54
• Plasmid unclonability p-value: 0.174489
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAAAAA AAAAGAATGT GCTAATACGA AAAATTATTG CTGAGAATCG TAAAGCTCGT 
TTTAATTTTG AACTGCTCGA GCATCTTGAA GCTGGTATTG TATTAAATGG AACGGAGGTT 
AAATCTTTGC GTTCCAATCA TGCTAATATT GCTGAAAGTT ATGCTAGCTT TGAAAATGAA 
GAATTGTGGT TGGTTAATGC CCATATTCCT GAATACACGC AGGCTAATCG TTTTAATCAT 
GAGCCGCGTC GTTTGCGTAA ATTATTAGTT TCAAAACGTG AAATAGGGCG TTTTTTTAAT 
GCAGTTTCTC GTGAAGGAAT GACGATTGTT CCGCTTAAAC TTTATTTTAA TGAACGAGGA 
TGCGTTAAAT TAGAGATTGC TTTGGCACGT GGTAAAAAGA TCCACGATAA ACGCGAAACA 
GAGAAAAAAC GCGATTGGGG ACGTGAAAAG GCAAGACTTT TAAGACGATA TGGGTAA 

 

Protein sequence

MRKKKNVLIR KIIAENRKAR FNFELLEHLE AGIVLNGTEV KSLRSNHANI AESYASFENE 
ELWLVNAHIP EYTQANRFNH EPRRLRKLLV SKREIGRFFN AVSREGMTIV PLKLYFNERG 
CVKLEIALAR GKKIHDKRET EKKRDWGREK ARLLRRYG