| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BARBAKC583_0453 |
|---|
| Symbol | |
|---|
| ID | 4683967 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bartonella bacilliformis KC583 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008783 |
|---|
| Strand | + |
|---|
| Start bp | 459089 |
|---|
| End bp | 459862 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 639841646 |
|---|
| Product | N-acetylmuramoyl-L-alanine amidase family protein |
|---|
| Protein accession | YP_988770 |
|---|
| Protein GI | 121602079 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG3023] Negative regulator of beta-lactamase expression |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 52 |
|---|
| Plasmid unclonability p-value | 0.266407 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATACAA TTGATTATAA TAAGTATCGT TCTGTAAAAG GTTTTAACAA TCGCGTTCGT
TTTTTAGTTA TGCATTACAC TGCAGTTAAC TTTGAGAAGT CGATCGCATC TCTTACGGGA
GCTGATGTTA GTGCCCATTA TCTTGTTCCT GATCCTATGG AGGAAACGTA TATCGCATCT
GGTTTTAAAG GTGTACATAT TTTTAATTTA GTTGATGAAG ACAAACGTTC ATGGCATGCT
GGTGTTAGTT CATGGGCTGG GCGTGCAAAC TTAAATGACA CTGCTATTGG GATTGAAACA
GTCAGTTTAG CTACCGAAAA AGATGGGGTA TTTACATTCC CACCTTATAA TTTAAATCAA
ATTGATGCAA TTAAAAAACT TTCATTAAAT ATTCTGCAAC GTTATCCAGA TATTACGCCA
ACCAATGTTG TCGGTCATAG TGATATTTCT ATTGGAAGAA AAAGTGATCC AGGTGCGGCT
TTTCCATGGA AAGAGCTTTA TGAAGCCGGT ATAGGGGCAT GGTATGATGA GGAAGTGAAA
AATAAATATT ATCATCACTT CCTTAGGGAG ATAAAGCTGC CCAGTAAAGA AGAGGTTATT
ACTCGACTTA AGCGATATGG GTATGATACT TCGGCTGCGG ATAGTGATAA GGGCTTCAAG
AATTTGATCC GAGCATTTCA GCTTCATTTT CGCCAAAAAA ATTACGATGG GGTATTGGAT
ATTGAAACAT TAGCAATCCT ATATGCGTTG CTAGATAAAT ATTTTCCAAG ATAG
|
|---|
| Protein sequence | MYTIDYNKYR SVKGFNNRVR FLVMHYTAVN FEKSIASLTG ADVSAHYLVP DPMEETYIAS
GFKGVHIFNL VDEDKRSWHA GVSSWAGRAN LNDTAIGIET VSLATEKDGV FTFPPYNLNQ
IDAIKKLSLN ILQRYPDITP TNVVGHSDIS IGRKSDPGAA FPWKELYEAG IGAWYDEEVK
NKYYHHFLRE IKLPSKEEVI TRLKRYGYDT SAADSDKGFK NLIRAFQLHF RQKNYDGVLD
IETLAILYAL LDKYFPR
|
|---|
| |