| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | B21_04197 |
|---|
| Symbol | ybl229 |
|---|
| ID | 8115091 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012892 |
|---|
| Strand | + |
|---|
| Start bp | 4507506 |
|---|
| End bp | 4508003 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 644850337 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003001910 |
|---|
| Protein GI | 251787606 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR02337] homoprotocatechuate degradation operon regulator, HpaR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAATT GTTTCTATAT TAATGATTTT GAATTTTTCA GGGGAAAGAT AATGCACGAC
TCACTAACCA TTGCGTTGCT CCAGGCGCGA GAAGCGGCGA TGAGTTATTT TCGCCCAATC
GTTAAACGGC ATAATTTGAC TGAGCAACAG TGGCGCATCG TGCGTATTCT GGCGGAAAGC
CCATCAATGG ATTTTCACGA TCTGGCGTAT CGCGCCTGCA TTTTGCGCCC AAGCCTGACC
GGGATCCTCA CGCGGATGGA ACGCGACGGT TTAGTGTTGC GATTAAAGCC GATCAATGAT
CAGCGGAAGC TCTATATCTC GCTGACCAAA GAGGGGCAGG CGCTGTATAA CCGCGCTCAG
ACACAGATTG AAGAAGCCTA TCGGCAGATT GAAGCTCAGT TTACTGCCGA GAAAATGCAA
CAGTTAACCC ATCTGTTAGA GGAATTTATT GCTCTGGGCA ATTCCCGACA AGAAGACATC
CCGGGCGATA ATGAATAA
|
|---|
| Protein sequence | MINCFYINDF EFFRGKIMHD SLTIALLQAR EAAMSYFRPI VKRHNLTEQQ WRIVRILAES
PSMDFHDLAY RACILRPSLT GILTRMERDG LVLRLKPIND QRKLYISLTK EGQALYNRAQ
TQIEEAYRQI EAQFTAEKMQ QLTHLLEEFI ALGNSRQEDI PGDNE
|
|---|
| |