Gene B21_04145 details

Gene Information

• Locus tag: B21_04145
• Symbol: fimA
• ID: 8115462
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli BL21
• Kingdom: Bacteria
• Replicon accession: NC_012892
• Strand: +
• Start bp: 4450484
• End bp: 4451032
• Gene Length: 549 bp
• Protein Length: 182 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 644850289
• Product: hypothetical protein
• Protein accession: YP_003001862
• Protein GI: 251787558
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG3539] P pilus assembly protein, pilin FimA

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAATTA AAACTCTGGC AATCGTTGTT CTGTCGGCTC TGTCCCTCAG TTCTACAGCG 
GCTCTGGCCG CTGCCACGAC GGTTAATGGT GGGACCGTTC ACTTTAAAGG GGAAGTTGTT 
AACGCCGCTT GCGCAGTTGA TGCAGGCTCT GTTGATCAAA CCGTTCAGTT AGGACAGGTT 
CGTACCGCAT CGCTGGCACA GGAAGGAGCA ACCAGTTCTG CTGTCGGTTT TAACATTCAG 
CTGAATGATT GCGATACCAA TGTTGCATCT AAAGCCGCTG TTGCCTTTTT AGGTACGGCG 
ATTGATGCGG GTCATACCAA CGTTCTGGCT CTGCAGAGTT CAGCTGCGGG TAGCGCAACA 
AACGTTGGTG TGCAGATCCT GGACAGAACG GGTGCTGCGC TGACGCTGGA TGGTGCGACA 
TTTAGTTCAG AAACAACCCT GAATAACGGA ACCAATACCA TTCCGTTCCA GGCGCGTTAT 
TTTGCAACCG GGGCCGCAAC CCCGGGTGCT GCTAATGCGG ATGCGACCTT CAAGGTTCAG 
TATCAATAA 

 

Protein sequence

MKIKTLAIVV LSALSLSSTA ALAAATTVNG GTVHFKGEVV NAACAVDAGS VDQTVQLGQV 
RTASLAQEGA TSSAVGFNIQ LNDCDTNVAS KAAVAFLGTA IDAGHTNVLA LQSSAAGSAT 
NVGVQILDRT GAALTLDGAT FSSETTLNNG TNTIPFQARY FATGAATPGA ANADATFKVQ 
YQ