Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | B21_04048 |
Symbol | cpdB |
ID | 8116676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21 |
Kingdom | Bacteria |
Replicon accession | NC_012892 |
Strand | - |
Start bp | 4346073 |
End bp | 4348016 |
Gene Length | 1944 bp |
Protein Length | 647 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644850198 |
Product | hypothetical protein |
Protein accession | YP_003001771 |
Protein GI | 251787467 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
TIGRFAM ID | [TIGR01390] 2',3'-cyclic-nucleotide 2'-phosphodiesterase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.897161 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAAGT TTAGCGCAAC GCTCCTGGCC ACGCTGATTG CCGCCAGTGT GAATGCAGCG ACGGTCGATC TACGTATCAT GGAAACCACT GATCTGCATA GCAACATGAT GGATTTCGAT TATTACAAAG ACACCGCCAC GGAAAAATTC GGACTGGTAC GTACGGCAAG CCTGATTAAC GATGCCCGCA ATGAAGTGAA AAACAGCGTA CTGGTCGATA ACGGCGATTT GATTCAGGGG AGTCCGCTGG CCGATTACAT ATCGGCGAAA GGATTAAAAG CAGGTGATGT TCATCCGGTT TATAAGGCGC TGAATACGCT GGATTATACG GTCGGTACAC TCGGCAATCA TGAATTTAAC TACGGTCTGG ATTACCTGAA AAATGCGTTG GCGGGAGCGA AATTCCCTTA TGTAAATGCC AACGTCATTG ACGCCAGAAC CAAACAGCCA ATGTTTACAC CGTATTTAAT TAAAGATACC GAAGTGGTCG ATAAAGACGG AAAAAAACAG ACGCTGAAGA TTGGCTATAT TGGCGTCGTG CCGCCGCAAA TCATGGGCTG GGATAAAGCT AATTTATCCG GAAAAGTGAC GGTGAATGAT ATTACCGAAA CCGTGCGCAA ATACGTGCCT GAAATGCGCG AGAAAGGTGC CGATGTCGTT GTCGTTCTGG CGCATTCCGG GCTATCTGCC GATCCGTATA AAGTGATGGC GGAAAACTCA GTTTATTACC TCAGTGAAAT TCCTGGCGTT AACGCCATTA TGTTTGGCCA TGCTCACGCC GTTTTCCCAG GTAAAGATTT TGCTGATATC GAAGGGGCTG ATATCGCGAA AGGCACGCTG AATGGTGTTC CGGCGGTAAT GCCGGGCATG TGGGGCGATC ATCTTGGGGT GGTCGACTTA CAACTCAGTA ATAACAGCGG TAAATGGCAG GTGACGCAGG CGAAAGCGGA AGCACGGCCG ATTTACGACA TCGCCAATAA AAAATCCCTC GCGGCGGAAG ACAGCAAGCT GGTAGAAACA CTCAAAGCCG ATCACGATGC CACACGCCAG TTCGTCAGCA AGCCAATCGG TAAATCCGCC GACAATATGT ATAGCTATCT GGCGCTGGTG CAGGACGATC CGACCGTGCA GGTGGTGAAC AACGCGCAAA AAGCGTATGT CGAGCATTAC ATTCAGGGCG ATCCGGATCT GGCAAAACTG CCGGTGCTTT CAGCTGCTGC ACCGTTTAAA GTTGGTGGTC GCAAAAATGA TCCGGCAAGC TATGTGGAGG TGGAAAAAGG CCAGTTGACC TTCCGTAATG CCGCCGATCT TTATCTCTAC CCCAATACGC TGATTGTGGT GAAAGCCAGC GGTAAAGAGG TGAAAGAGTG GCTGGAGTGC TCCGCCGGAC AGTTTAACCA GATTGATCCT GACAACACGA AACCACAGTC ACTCATCAAC TGGGATGGTT TCCGCACCTA TAACTTTGAT GTGATTGATG GTGTGAATTA TCAGATTGAT GTTACCCAGC CTGCCCGTTA TGACGGCGAG TGCCAGATGG TTAATGCCAA TGCGGAAAGG ATTAAGAACC TGACCTTTAA TGGCAAGCCG ATTGATCCGA ACGCCATGTT CCTGGTTGCC ACCAATAACT ATCGCGCTTA CGGCGGCAAA TTTGCCGGTA CGGGCGACAG CCATATCGCT TTTGCTTCAC CGGATGAGAA CCGCTCGGTG CTGGCAGCGT GGATTGCTGA TGAGTCGAAA CGTGCGGGGG AAATTCACCC GGCGGCAGAT AACAACTGGC GTTTAGCACC GATAGCTGGC GATAAGAAAC TGGATATCCG TTTCGAAACC TCTCCATCAG ATAAAGCCGC GGCGTTTATT AAAGAGAAAG GGCAATATCC GATGAATAAA GTCGCGACCG ATGATATCGG GTTTGCGATT TATCAGGTGG ATTTGAGTAA GTAA
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Protein sequence | MIKFSATLLA TLIAASVNAA TVDLRIMETT DLHSNMMDFD YYKDTATEKF GLVRTASLIN DARNEVKNSV LVDNGDLIQG SPLADYISAK GLKAGDVHPV YKALNTLDYT VGTLGNHEFN YGLDYLKNAL AGAKFPYVNA NVIDARTKQP MFTPYLIKDT EVVDKDGKKQ TLKIGYIGVV PPQIMGWDKA NLSGKVTVND ITETVRKYVP EMREKGADVV VVLAHSGLSA DPYKVMAENS VYYLSEIPGV NAIMFGHAHA VFPGKDFADI EGADIAKGTL NGVPAVMPGM WGDHLGVVDL QLSNNSGKWQ VTQAKAEARP IYDIANKKSL AAEDSKLVET LKADHDATRQ FVSKPIGKSA DNMYSYLALV QDDPTVQVVN NAQKAYVEHY IQGDPDLAKL PVLSAAAPFK VGGRKNDPAS YVEVEKGQLT FRNAADLYLY PNTLIVVKAS GKEVKEWLEC SAGQFNQIDP DNTKPQSLIN WDGFRTYNFD VIDGVNYQID VTQPARYDGE CQMVNANAER IKNLTFNGKP IDPNAMFLVA TNNYRAYGGK FAGTGDSHIA FASPDENRSV LAAWIADESK RAGEIHPAAD NNWRLAPIAG DKKLDIRFET SPSDKAAAFI KEKGQYPMNK VATDDIGFAI YQVDLSK
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