Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | B21_03912 |
Symbol | yjcP |
ID | 8115417 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21 |
Kingdom | Bacteria |
Replicon accession | NC_012892 |
Strand | - |
Start bp | 4204841 |
End bp | 4206307 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644850065 |
Product | hypothetical protein |
Protein accession | YP_003001638 |
Protein GI | 251787334 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAATC GTCAACTTTC ACGTCTGCTG TTGTGCAGCA TTCTCGGCAG CACGACGCTG ATTTCCGGCT GTGCCCTGGT ACGTAAGGAT TCTGCACCTC ATCAACAGCT CAAACCGGAA CAAATCAAAC TGGCCGACGA TATTCATCTT GCCAGCTCCG GCTGGCCGCA GGCGCAGTGG TGGAAACAAC TCAATGACCC GCAGCTGGAT GCGCTGATCC AACGGACGCT AAGTGGTTCA CACACCCTCG CCGAAGCGAA ACTGCGGGAA GAAAAAGCGC AGTCCCAGGC CGATTTGTTA GATGCCGGTT CACAATTACA GGTCGCAGCG TTAGGGATGC TCAACCGCCA ACGTGTCTCG GCAAACGGCT TTTTAAGCCC TTATTCAATG GATGCGCCAG CACTGGGTAT GGACGGGCCG TACTATACGG AAGCCACAGT AGGTTTGTTT GCCGGACTGG ATCTTGATTT GTGGGGTGTG CATCGCTCAG CGGTTGCCGC CGCCATTGGC GCGCATAATG CCGCGCTGGC AGAAACCGCA GCAGTAGAGC TATCGCTGGC CACGGGCGTA GCGCAGCTTT ATTACAGTAT GCAGGCCAGC TATCAGATGC TCGATCTGTT AGAACAAACT CACGATGTGA TTGATTACGC GGTGAAAGCG CACCAGAGTA AAGTGGCGCA CGGTCTGGAA GCGCAAGTGC CTTTCCACGG CGCGCGGGCA CAGATTCTGG CGGTCGATAA ACAAATTGTT GCCGTCAAAG GGCAAATCAC CGAAACGCGA GAATCTCTGC GTGCATTGAT TGGCGCGGGA GCCAGCGATA TGCCGGAGAT CAGACCGGTG GCATTACCGC AAGTCCAGAC CGGCATTCCG GCGACACTCT CTTATGAGTT GCTCGCCAGA CGCCCGGATC TGCAAGCCAT GCGCTGGTAT GTTCAGGCGT CATTAGATCA GGTGGATTCC GCGCGGGCGT TGTTCTATCC GAGCTTTGAT ATCAAAGCGT TTTTCGGTCT GGACTCCATC CATCTGCATA CCTTATTCAA AAAAACCAGT CGCCAGTTCA ACTTCATCCC GGGTCTGAAA TTGCCGCTGT TTGACGGTGG ACGGTTGAAT GCCAATCTCG AAGGCACGCG CGCCGCCAGC AACATGATGA TTGAACGTTA CAACCAGTCA GTACTGAACG CGGTGCGTGA CGTTGCCGTC AACGGCACGC GTCTGCAAAC GCTCAACGAC GAGCGAGAAA TGCAGGCTGA ACGCGTGGAA GCCACGCGCT TTACCCAGCG CGCTGCCGAG GCCGCCTATC AGCGCGGCTT AACCAGCCGC TTACAGGCCA CCGAAGCCCG GTTGCCAGTG CTTGCCGAAG AGATGTCATT ACTGATGCTG GACAGCCGCC GGGTGATCCA AAGCATTCAG TTGATGAAAT CGCTGGGCGG CGGGTATCAG GCAGGTCCCG TCGTCGAGAA AAAATAA
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Protein sequence | MINRQLSRLL LCSILGSTTL ISGCALVRKD SAPHQQLKPE QIKLADDIHL ASSGWPQAQW WKQLNDPQLD ALIQRTLSGS HTLAEAKLRE EKAQSQADLL DAGSQLQVAA LGMLNRQRVS ANGFLSPYSM DAPALGMDGP YYTEATVGLF AGLDLDLWGV HRSAVAAAIG AHNAALAETA AVELSLATGV AQLYYSMQAS YQMLDLLEQT HDVIDYAVKA HQSKVAHGLE AQVPFHGARA QILAVDKQIV AVKGQITETR ESLRALIGAG ASDMPEIRPV ALPQVQTGIP ATLSYELLAR RPDLQAMRWY VQASLDQVDS ARALFYPSFD IKAFFGLDSI HLHTLFKKTS RQFNFIPGLK LPLFDGGRLN ANLEGTRAAS NMMIERYNQS VLNAVRDVAV NGTRLQTLND EREMQAERVE ATRFTQRAAE AAYQRGLTSR LQATEARLPV LAEEMSLLML DSRRVIQSIQ LMKSLGGGYQ AGPVVEKK
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