Gene B21_03895 details

Gene Information

• Locus tag: B21_03895
• Symbol: soxR
• ID: 8115136
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli BL21
• Kingdom: Bacteria
• Replicon accession: NC_012892
• Strand: +
• Start bp: 4182969
• End bp: 4183433
• Gene Length: 465 bp
• Protein Length: 154 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 644850049
• Product: hypothetical protein
• Protein accession: YP_003001622
• Protein GI: 251787318
• COG category: [K] Transcription
• COG ID: [COG0789] Predicted transcriptional regulators
• TIGRFAM ID: [TIGR01950] redox-sensitive transcriptional activator SoxR

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.0184757
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAAGA AATTACCCCG CATTAAAGCG CTGCTAACCC CCGGCGAAGT GGCGAAACGC 
AGCGGTGTGG CGGTATCGGC GCTGCATTTC TATGAAAGTA AAGGGTTGAT TACCAGTATC 
CGTAACAGCG GCAATCAGCG GCGATATAAA CGTGATGTGT TGCGATATGT TGCAATTATC 
AAAATTGCTC AGCGTATTGG CATTCCGCTG GCGACCATTG GTGAAGCGTT TGGCGTGTTG 
CCCGAAGGGC ATACGTTAAG TGCGAAAGAG TGGAAACAGC TTTCGTCCCA ATGGCGAGAA 
GAGTTGGATC GGCGCATTCA TACCTTAGTG GCGCTGCGTG ACGAACTGGA CGGATGTATT 
GGTTGTGGCT GCCTTTCGCG CAGTGATTGC CCGTTGCGTA ACCCGGGCGA CCGCTTAGGA 
GAAGAAGGTA CCGGCGCACG CTTGCTGGAA GATGAACAAA ACTAA 

 

Protein sequence

MEKKLPRIKA LLTPGEVAKR SGVAVSALHF YESKGLITSI RNSGNQRRYK RDVLRYVAII 
KIAQRIGIPL ATIGEAFGVL PEGHTLSAKE WKQLSSQWRE ELDRRIHTLV ALRDELDGCI 
GCGCLSRSDC PLRNPGDRLG EEGTGARLLE DEQN