| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | B21_02854 |
|---|
| Symbol | cpdA |
|---|
| ID | 8115889 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012892 |
|---|
| Strand | - |
|---|
| Start bp | 3042647 |
|---|
| End bp | 3043474 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644849042 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003000615 |
|---|
| Protein GI | 251786311 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1409] Predicted phosphohydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGAAAGCC TGTTAACCCT TCCTCTGGCT GGTGAGGCCA GAGTCAGGAT TTTACAAATT
ACCGATACTC ACCTGTTTGC ACAAAAGCAC GAAGCCCTGT TAGGGGTAAA CACCTGGGAA
AGCTACCAGG CGGTGCTGGA GGCGATTCGT CCACACCAGC ACGAATTCGA CCTGATTGTC
GCGACAGGTG ATTTAGCGCA GGATCAATCC TCTGCGGCCT ATCAGCATTT CGCTGAAGGC
ATCGCAAGTT TTCGTGCGCC CTGCGTCTGG CTGCCGGGCA ACCACGATTT CCAGCCCGCG
ATGTACAGCG CGTTACAGGA TGCGGGTATC TCCCCGGCGA AGCGCGTGTT TATTGGTGAG
CAATGGCAAA TCCTGTTGCT GGATAGCCAG GTGTTTGGCG TGCCGCACGG TGAGCTGAGC
GAGTTTCAGC TTGAGTGGCT GGAACGTAAA CTGGCCGATG CGCCAGGACG CCATACGTTG
CTGCTGCTGC ATCATCATCC GCTACCTGCG GGTTGTAGTT GGCTCGATCA ACACAGCCTG
CGTAACGCGG GCGAACTGGA TACCGTGCTG GCGAAGTTTC CGCACGTCAA ATACTTGCTG
TGCGGTCATA TTCATCAGGA GCTGGATCTC GACTGGAACG GTCGCCGCCT GCTGGCAACG
CCGTCGACCT GTGTGCAGTT TAAGCCGCAC TGTTCCAACT TTACGCTGGA CACCATCGCG
CCCGGCTGGC GTACTCTCGA GTTACATGCT GATGGCACGC TGACCACCGA GGTGCATCGC
CTGGCGGACA CACGTTTCCA ACCTGATACC GCTTCAGAAG GCTACTGA
|
|---|
| Protein sequence | MESLLTLPLA GEARVRILQI TDTHLFAQKH EALLGVNTWE SYQAVLEAIR PHQHEFDLIV
ATGDLAQDQS SAAYQHFAEG IASFRAPCVW LPGNHDFQPA MYSALQDAGI SPAKRVFIGE
QWQILLLDSQ VFGVPHGELS EFQLEWLERK LADAPGRHTL LLLHHHPLPA GCSWLDQHSL
RNAGELDTVL AKFPHVKYLL CGHIHQELDL DWNGRRLLAT PSTCVQFKPH CSNFTLDTIA
PGWRTLELHA DGTLTTEVHR LADTRFQPDT ASEGY
|
|---|
| |