Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | B21_02788 |
Symbol | pulD |
ID | 8113497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21 |
Kingdom | Bacteria |
Replicon accession | NC_012892 |
Strand | - |
Start bp | 2969485 |
End bp | 2971545 |
Gene Length | 2061 bp |
Protein Length | 686 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644848978 |
Product | hypothetical protein |
Protein accession | YP_003000551 |
Protein GI | 251786247 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1450] Type II secretory pathway, component PulD |
TIGRFAM ID | [TIGR02517] general secretion pathway protein D |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000655056 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTTTGGC GTGATATTAC GTTGTCGGTC TGGCGTAAGA AGACAACTGG CCTCAAAACA AAAAAGCGTT TACTGCCGCT GGTGCTGGCA GCGGCATTAT GCAGTTCACC GGTTTGGGCG GAAGAAGCCA CTTTCACCGC CAATTTTAAA GATACCGACC TGAAATCGTT CATCGAAACC GTCGGCGCTA ACCTTAATAA AACCATCATT ATGGGGCCGG GCGTACAGGG GAAAGTGAGT ATTCGTACCA TGACTCCGCT CAATGAACGC CAGTATTACC AGCTATTCCT TAACCTGCTG GAAGCACAGG GGTATGCCGT CGTACCGATG GAAAACGACG TGCTGAAGGT GGTGAAATCC AGCGCCGCGA AAGTCGAGCC ACTGCCGCTG GTCGGTGAAG GCAGCGACAA CTACGCGGGC GATGAAATGG TCACCAAAGT AGTGCCGGTA CGTAATGTGT CGGTCCGCGA ATTGGCACCG ATTCTGCGCC AGATGATCGA CAGCGCAGGC TCAGGCAACG TTGTTAATTA CGATCCCTCC AACGTGATTA TGCTCACCGG ACGCGCCTCC GTTGTGGAGC GCCTGACGGA AGTGATCCAG CGTGTGGATC ACGCGGGTAA TCGCACTGAA GAGGTGATCC CGCTGGATAA CGCCTCGGCT TCGGAAATCG CCCGCGTGCT GGAAAGCCTG ACCAAAAACA GCGGCGAGAA CCAGCCAGCA ACGCTGAAAT CTCAAATTGT CGCCGATGAA CGCACCAACA GCGTGATTGT CAGTGGTGAC CCCGCCACGC GGGACAAAAT GCGCCGTCTG ATCCGTCGCC TGGACTCAGA AATGGAGCGC AGCGGCAACA GCCAGGTTTT CTATCTCAAA TACAGCAAAG CCGAAGATCT GGTCGATGTA CTGAAGCAGG TCAGCGGTAC GCTCACGGCG GCTAAAGAAG AGGCGGAAGG CACGGTCGGT AGCGGGCGTG AGGTTGTCTC CATCGCCGCC AGCAAACACA GTAATGCCCT GATTGTTACC GCGCCGCAGG ACATCATGCA GTCGCTGCAA AGCGTGATTG AACAACTGGA TATTCGCCGT GCTCAGGTGC ATGTCGAGGC GTTGATCGTG GAAGTTGCTG AAGGCAGCAA TATCAACTTC GGCGTGCAGT GGGCGTCGAA AGATGCCGGA TTAATGCAGT TTGCTAACGG TACGCAGATC CCTATTGGCA CGCTGGGGGC AGCCATTTCT CAGGCGAAAC CGCAGAAAGG CTCGACGGTA ATCAGTGAAA ACGGCGCTAC CACCATAAAT CCGGATACTA ACGGCGATCT CTCCACGCTT GCTCAGCTTC TTTCCGGCTT TAGCGGTACG GCGGTTGGTG TGGTGAAAGG CGACTGGATG GCGCTGGTGC AGGCGGTTAA AAACGACTCC AGCTCTAACG TGCTCTCCAC GCCGAGCATC ACCACGCTGG ACAACCAGGA AGCCTTCTTC ATGGTGGGCC AGGACGTTCC GGTATTAACT GGATCTACCG TTGGCTCCAA TAACAGCAAT CCTTTCAATA CGGTAGAGAG GAAAAAAGTC GGCATCATGC TGAAAGTCAC GCCGCAGATT AACGAAGGAA ACGCGGTACA GATGGTGATT GAGCAGGAAG TCTCGAAGGT GGAAGGACAG ACCAGCCTCG ACGTCGTGTT TGGTGAGCGC AAACTGAAGA CCACCGTGCT GGCTAACGAT GGCGAGCTGA TTGTGCTTGG CGGTCTGATG GATGATCAGG CAGGAGAAAG CGTGGCGAAA GTGCCGCTGC TGGGCGATAT CCCGTTGATT GGTAACCTGT TTAAATCGAC GGCGGATAAA AAAGAAAAAC GTAACCTGAT GGTGTTTATC CGCCCGACCA TTCTGCGTGA CGGTATGGCG GCAGACGGCG TGTCGCAGCG CAAATATAAC TACATGCGCG CCGAGCAAAT CTACCGCGAT GAGCAAGGCT TAAGCCTGAT GCCGCACACC GCGCAGCCGG TACTGCCAGC GCAAAACCAG GCCTTACCGC CGGAAGTTCG CGCATTCCTC AATGCCGGGA GAACGCGTTA A
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Protein sequence | MFWRDITLSV WRKKTTGLKT KKRLLPLVLA AALCSSPVWA EEATFTANFK DTDLKSFIET VGANLNKTII MGPGVQGKVS IRTMTPLNER QYYQLFLNLL EAQGYAVVPM ENDVLKVVKS SAAKVEPLPL VGEGSDNYAG DEMVTKVVPV RNVSVRELAP ILRQMIDSAG SGNVVNYDPS NVIMLTGRAS VVERLTEVIQ RVDHAGNRTE EVIPLDNASA SEIARVLESL TKNSGENQPA TLKSQIVADE RTNSVIVSGD PATRDKMRRL IRRLDSEMER SGNSQVFYLK YSKAEDLVDV LKQVSGTLTA AKEEAEGTVG SGREVVSIAA SKHSNALIVT APQDIMQSLQ SVIEQLDIRR AQVHVEALIV EVAEGSNINF GVQWASKDAG LMQFANGTQI PIGTLGAAIS QAKPQKGSTV ISENGATTIN PDTNGDLSTL AQLLSGFSGT AVGVVKGDWM ALVQAVKNDS SSNVLSTPSI TTLDNQEAFF MVGQDVPVLT GSTVGSNNSN PFNTVERKKV GIMLKVTPQI NEGNAVQMVI EQEVSKVEGQ TSLDVVFGER KLKTTVLAND GELIVLGGLM DDQAGESVAK VPLLGDIPLI GNLFKSTADK KEKRNLMVFI RPTILRDGMA ADGVSQRKYN YMRAEQIYRD EQGLSLMPHT AQPVLPAQNQ ALPPEVRAFL NAGRTR
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