| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | B21_01684 |
|---|
| Symbol | yniC |
|---|
| ID | 8116523 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012892 |
|---|
| Strand | + |
|---|
| Start bp | 1753108 |
|---|
| End bp | 1753776 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 644847907 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002999480 |
|---|
| Protein GI | 251785176 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
|---|
| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAACCC CGCGTCAGAT TCTTGCTGCA ATTTTTGATA TGGATGGATT ACTTATCGAC
TCAGAACCTT TATGGGATCG AGCCGAACTG GATGTGATGG CAAGCCTGGG GGTGGATATC
TCCCGTCGTA ACGAGCTGCC GGACACCTTA GGTTTACGCA TCGATATGGT GGTCGATCTT
TGGTACGCCC GGCAACCGTG GAATGGGCCA AGCCGTCAGG AAGTAGTAGA ACGGGTTATT
GCCCGTGCCA TTTCACTGGT TGAAGAGACA CGTCCATTAT TACCAGGCGT GCGCGAAGCC
GTTGCGTTAT GCAAAGAACA AGGTTTATTG GTGGGACTGG CCTCCGCGTC ACCACTACAT
ATGCTGGAAA AAGTGTTGAC CATGTTTGAC TTACGCGACA GTTTCGATGC CCTCGCCTCG
GCTGAAAAAC TGCCTTACAG CAAGCCGCAT CCGCAAGTAT ATCTCGACTG CGCAGCAAAA
CTGGGCGTTG ACCCACTGAC CTGCGTAGCG CTGGAAGACT CGGTAAATGG CATGATCGCC
TCTAAAGCAG CCCGCATGCG TTCCATCGTC GTTCCTGCGC CAGAAGCGCA AAATGATCCA
CGTTTTGTAT TAGCAGACGT CAAACTCTCA TCGCTGACAG AACTCACCGC AAAAGACCTT
CTCGGTTAA
|
|---|
| Protein sequence | MSTPRQILAA IFDMDGLLID SEPLWDRAEL DVMASLGVDI SRRNELPDTL GLRIDMVVDL
WYARQPWNGP SRQEVVERVI ARAISLVEET RPLLPGVREA VALCKEQGLL VGLASASPLH
MLEKVLTMFD LRDSFDALAS AEKLPYSKPH PQVYLDCAAK LGVDPLTCVA LEDSVNGMIA
SKAARMRSIV VPAPEAQNDP RFVLADVKLS SLTELTAKDL LG
|
|---|
| |