Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | B21_01625 |
Symbol | ydhQ |
ID | 8112996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21 |
Kingdom | Bacteria |
Replicon accession | NC_012892 |
Strand | - |
Start bp | 1689455 |
End bp | 1690711 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644847852 |
Product | hypothetical protein |
Protein accession | YP_002999425 |
Protein GI | 251785121 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3468] Type V secretory pathway, adhesin AidA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.667562 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGATCTG ATGCGAAAAA CTTGATGAGC GACGGGAACG TGCAAATTGT TAAGACCGGC GAGGTCATTG GCGCGACTCA ACTTACTGAA GGCGAGTTAA TTGTTGAGGC TGGCGGAAGA GCTGAAAATA CCGTGGTCAC GGGGACCGGC TGGTTGAAAG TTGCAACCGG TGGGATCGTC AAATGCACAC AGTACGGTAA CAATGGCACG CTATCGGTCA GCGACGGTGC CATTGCCACA GATGTTGTTC AGTCCGAGGG AGGCGCAATT AGTCTCTCTA CGCTCGCTAC GGTTAATGGC CGCCATCCCG AAGGTGAATT CAGCGTTGAT CAGGGTTATG CCTGCGGTTT GTTGCTGGAA AATGGCGGTA ACCTGCGTGT ACTGGAAGGA CATCGCGCGG AAAAAATCAT TCTCGATCAA GAGGGCGGCC TGTTGGTCAA TGGGACAACC TCAGCGGTCG TGGTAGATGA AGGTGGTGAA TTGTTGGTGT ATCCAGGTGG GGAAGCCAGC AATTGTGAGA TTAATCAGGG CGGCGTTTTT ATGCTGGCCG GGAAAGCCAG TGATACGTTG CTTGCTGGTG GCACCATGAA TAATCTCGGT GGTGAAGACT CTGACACTAT TGTTGAGAAT GGATCCATTT ATCGTCTGGG GACGGATGGC CTTCAGCTCT ACAGTTCCGG TAAGACGCAA AACCTGTCCG TGAATGTGGG GGGTCGGGCT GAAGTGCATG CCGGTACGCT GGAAAATGCG GTAATACAAG GTGGAACAGT GATCCTGTTG TCACCCACCA GCGCGGACGA AAATTTTGTC GTAGAGGAAG ATCGCGCACC GGTTGAACTG ACCGGGAGTG TTGCATTACT GGACGGCGCT TCAATGATTA TTGGTTATGG CGCAGAGCTG CAACAATCAA CGATTACTGT ACAGCAGGGC GGTGTGTTGA TTCTCGACGG CAGTACGGTA AAAGGTGACA GTGTCACTTT CATTGTTGGT AACATCAATC TGAATGGCGG AAAACTGTGG CTGATCACTG GTGCGGCAAC GCATGTGCAA CTGAAAGTGA AACGCCTGCG CGGAGAGGGA GCGATTTGCC TGCAAACCAG TGCGAAAGAA ATTTCACCTG ACTTCATCAA TGTGAAAGGG GAAGTTACCG GGGATATACG CGTTGAGATA ACAGATGCCA GTCGGCAAAC TCTGTGTAAC GCACTGAAAC TACAGCCAGA CGAAGACGGG ATTGGCGCAA CGCTCCAGCC TGCGTAA
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Protein sequence | MGSDAKNLMS DGNVQIVKTG EVIGATQLTE GELIVEAGGR AENTVVTGTG WLKVATGGIV KCTQYGNNGT LSVSDGAIAT DVVQSEGGAI SLSTLATVNG RHPEGEFSVD QGYACGLLLE NGGNLRVLEG HRAEKIILDQ EGGLLVNGTT SAVVVDEGGE LLVYPGGEAS NCEINQGGVF MLAGKASDTL LAGGTMNNLG GEDSDTIVEN GSIYRLGTDG LQLYSSGKTQ NLSVNVGGRA EVHAGTLENA VIQGGTVILL SPTSADENFV VEEDRAPVEL TGSVALLDGA SMIIGYGAEL QQSTITVQQG GVLILDGSTV KGDSVTFIVG NINLNGGKLW LITGAATHVQ LKVKRLRGEG AICLQTSAKE ISPDFINVKG EVTGDIRVEI TDASRQTLCN ALKLQPDEDG IGATLQPA
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