Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | B21_01490 |
Symbol | yneF |
ID | 8113349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21 |
Kingdom | Bacteria |
Replicon accession | NC_012892 |
Strand | - |
Start bp | 1558393 |
End bp | 1559340 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644847724 |
Product | hypothetical protein |
Protein accession | YP_002999297 |
Protein GI | 251784993 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCTTGCCG ACTGGTTCAG TGAGCAATTC TCAACGGGCG TGTTGATCGT GCCTTGTATG CTGACGTTGG CTATTCCTGG AGTGCTGCCG CGCTTTAAAG CAGAACAGAT GATGCCCGCC ATCGCGCTTA TTGTGTCGGT TATTGCCTCG GTAGTCATTG GCGGAGCGGG GAGTCTGGCG TTCCCGCTGC CTGCATTAAT CTGGTGTGCA GTGCGCTATA CGCCGCAGGT AACATGTCTG TTGACCTTTG TCACCGGTGC GGTGGAAATC GTACTGGTGG CAAATTCGGT GATTGATATC TCGGTCGGTT CGCCGTTCTC CATTCCGCAA ATGTTCTCCG CACGTCTCGG TATTGCCACG ATGGCGATAT GCCCAATTAT GGTTTCTTTT AGCGTGGCAG CGATCAATTC GCTAATGAAG CAAGTTGCGC TGCGAGCCGA CTTTGATTTT CTGACTCAGG TTTACTCACG GTCCGGTCTT TATGAGGCGC TGAAAAGTCC ATCGCTGAAA CAGACACAAC ATCTGACTGT CATGCTGCTT GATATCGACT ATTTCAAAAG CATTAACGAT AACTATGGAC ATGAATGTGG CGATAAAGTG TTAAGCGTGT TTGCCCGGCA TATTCAGAAG ATTGTCGGTG ATAAGGGGCT GGTGGCGCGA ATGGGCGGCG AAGAATTTGC TGTTGCAGTG CCGTCGGTGA ATCCTGTCGA TGGTCTGCTA ATGGCGGAAA AAATCCGTAA AGGCGTTGAA CTGCAACCAT TCACCTGGCA ACAAAAAACG CTTTATCTCA CGGTAAGTAT TGGCGTCGGT AGTGGTCGCG CATCGTACCG AACGCTGACC GATGACTTTA ATAAATTGAT GGTCGAAGCC GATACGTGTC TGTATCGCTC GAAGAAAGAT GGGCGCAACC GTACCAGCAC TATGCGTTAC GGTGAGGAAG TTGTCTGA
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Protein sequence | MLADWFSEQF STGVLIVPCM LTLAIPGVLP RFKAEQMMPA IALIVSVIAS VVIGGAGSLA FPLPALIWCA VRYTPQVTCL LTFVTGAVEI VLVANSVIDI SVGSPFSIPQ MFSARLGIAT MAICPIMVSF SVAAINSLMK QVALRADFDF LTQVYSRSGL YEALKSPSLK QTQHLTVMLL DIDYFKSIND NYGHECGDKV LSVFARHIQK IVGDKGLVAR MGGEEFAVAV PSVNPVDGLL MAEKIRKGVE LQPFTWQQKT LYLTVSIGVG SGRASYRTLT DDFNKLMVEA DTCLYRSKKD GRNRTSTMRY GEEVV
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