Gene B21_01100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagB21_01100 
SymbolpabC 
ID8116614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli BL21 
KingdomBacteria 
Replicon accessionNC_012892 
Strand
Start bp1155276 
End bp1156085 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content50% 
IMG OID644847357 
Producthypothetical protein 
Protein accessionYP_002998930 
Protein GI251784626 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID[TIGR03461] aminodeoxychorismate lyase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000707213 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCTTAA TTAACGGTTA TAAGCAGGAA TCGCTGGCAG TAAGCGATCG GGCAACGCAG 
TTTGGTGATG GTTGTTTTAC CACTGCCAGA GTTATCGACG GTAAAGTCAG TTTGTTATCG
GCGCATATCC AGCGACTACA GGATGCTTGT CAGCGGTTGA TGATTTCCTG TGACTTCTGG
CCTCAGCTTG AACAAGAGAT GAAAACGCTG GCAGCAGAAC AGCAAAATGG TGTACTGAAA
GTCGTGATCA GTCGCGGTAG TGGCGGGCGA GGGTACAGCA CATTGAACAG CGGACCAGCA
ACGCGGATTC TCTCCGTTAC GGCTTATCCT GCACATTACG ACCGTTTGCG TAACGAGGGG
ATGACGTTGG TGCTAAGCCC GGTGCGGCTG GGGCGCAATC CTCATCTTGC AGGTATTAAA
CATCTTAATC GGCTTGAGCA AGTATTGATT CGCTCTCATC TTGAGCAGAC AAACGCTGAT
GAGGCGCTGG TCCTTGACAG CGAAGGGTGG GTTACGGAAT GCTGTGCGGC TAATTTGTTC
TGGCGGAAGG GCAACGTAGT TTATACGCCG CGACTGGATC AGGCAGGTGT TAACGGCATT
ATGCGACAAT TCTGTATCCG TTTGCTGGCA CAATCCTCTT ATCAGCTTGT CGAAGTGCAA
GCTTCTCTGG AAGAGGCGTT GCAGGCAGAT GAGATGGTTA TTTGTAATGC GTTAATGCCA
GTGATGCCCG TACGTGCCTG TGGCGATGTC TCCTTTTCGT CAGCAACGTT ATATGAATAT
TTAGCCCCAC TTTGTGAGCG CCCGAATTAG
 
Protein sequence
MFLINGYKQE SLAVSDRATQ FGDGCFTTAR VIDGKVSLLS AHIQRLQDAC QRLMISCDFW 
PQLEQEMKTL AAEQQNGVLK VVISRGSGGR GYSTLNSGPA TRILSVTAYP AHYDRLRNEG
MTLVLSPVRL GRNPHLAGIK HLNRLEQVLI RSHLEQTNAD EALVLDSEGW VTECCAANLF
WRKGNVVYTP RLDQAGVNGI MRQFCIRLLA QSSYQLVEVQ ASLEEALQAD EMVICNALMP
VMPVRACGDV SFSSATLYEY LAPLCERPN