| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | B21_00887 |
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| Symbol | ybjD |
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| ID | 8115403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli BL21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012892 |
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| Strand | + |
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| Start bp | 920587 |
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| End bp | 922245 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644847149 |
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| Product | hypothetical protein |
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| Protein accession | YP_002998722 |
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| Protein GI | 251784418 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCTTG AGCGCGTTGA AATTGTGGGT TTTCGCGGTA TCAACCGTTT GTCGTTGATG
CTGGAACAAA ACAACGTCCT GATTGGGGAG AACGCGTGGG GTAAATCCAG CTTGCTGGAC
GCCTTAACTC TGCTGCTATC GCCAGAATCA GATCTCTACC ATTTTGAGCG CGACGATTTC
TGGTTCCCGC CGGGAGATAT CAACGGGCGA GAACATCATC TGCATATTAT TTTGACCTTC
CGCGAATCGC TGCCAGGCCG ACATCGGGTT CGCCGTTATC GGCCGCTGGA AGCGTGCTGG
ACGCCATGCA CCGATGGCTA TCACCGTATT TTTTATCGTC TGGAAGGGGA GAGTGCGGAA
GACGGCAGCG TGATGACACT GCGCAGTTTT CTCGATAAAG ACGGACATCC GATTGATGTC
GAGGATATTA ACGATCAGGC ACGCCATCTG GTGCGTTTAA TGCCGGTGCT GCGCTTGCGT
GATGCCCGTT TTATGCGCCG TATTCGTAAC GGCACGGTGC CAAATGTCCC TAATGTGGAA
GTCACCGCGC GCCAGCTCGA TTTCCTCGCC CGTGAGTTAT CCTCACATCC GCAAAATCTC
TCTGATGGGC AGATTCGTCA GGGACTTTCC GCAATGGTAC AGCTGCTTGA GCATTATTTC
TCTGAGCAGG GGGCCGGACA GGCGCGATAT CGTTTAATGC GGCGGCGAGC CAGCAATGAG
CAACGAAGCT GGCGCTATCT GGATATCATC AACCGGATGA TTGACCGACC TGGTGGGCGC
TCGTATCGGG TTATTTTGCT CGGCCTGTTT GCTACTTTGT TGCAGGCAAA AGGCACATTG
CGACTGGATA AAGACGCCCG TCCATTGTTG CTGATCGAAG ATCCAGAAAC CCGTTTACAC
CCCATTATGC TTTCAGTTGC CTGGCATCTG TTGAATCTTC TGCCATTGCA GCGCATTGCC
ACCACCAACT CGGGTGAGTT GCTTTCGTTA ACGCCGGTAG AGCATGTTTG CCGACTGGTA
CGTGAGTCCT CGCGCGTTGC CGCCTGGCGT CTGGGGCCGA GTGGCTTGAG TACCGAAGAT
AGCCGACGCA TATCCTTTCA CATTCGTTTT AACCGTCCGT CATCGCTGTT TGCACGCTGC
TGGTTGCTGG TGGAAGGGGA AACGGAAACC TGGGTTATCA ATGAACTGGC GCGTCAGTGC
GGACATCATT TTGATGCCGA AGGGATCAAG GTCATTGAGT TTGCCCAGTC CGGGCTAAAG
CCACTGGTTA AATTTGCCCG CCGAATGGGG ATTGAATGGC ATGTACTGGT CGATGGCGAT
GAAGCAGGGA AGAAATATGC CGCTACGGTA CGCAGCCTGT TGAATAACGA TCGGGAAGCC
GAACGAGAAC ATTTAACGGC GTTACCGGCG CTGGATATGG AACATTTTAT GTATCGCCAG
GGATTTTCCG ATGTGTTCCA CCGCATGGCG CAAATCCCGG AAAATGTACC GATGAATCTA
CGCAAAATTA TCTCGAAAGC GATCCATCGC TCTTCCAAAC CCGATCTTGC CATTGAAGTG
GCAATGGAGG CAGGACGTCG TGGTGTGGAC TCCGTACCGA CGCTGCTGAA AAAAATGTTC
TCACGCGTGC TGTGGCTGGC GCGCGGTCGC GCGGATTAA
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| Protein sequence | MILERVEIVG FRGINRLSLM LEQNNVLIGE NAWGKSSLLD ALTLLLSPES DLYHFERDDF
WFPPGDINGR EHHLHIILTF RESLPGRHRV RRYRPLEACW TPCTDGYHRI FYRLEGESAE
DGSVMTLRSF LDKDGHPIDV EDINDQARHL VRLMPVLRLR DARFMRRIRN GTVPNVPNVE
VTARQLDFLA RELSSHPQNL SDGQIRQGLS AMVQLLEHYF SEQGAGQARY RLMRRRASNE
QRSWRYLDII NRMIDRPGGR SYRVILLGLF ATLLQAKGTL RLDKDARPLL LIEDPETRLH
PIMLSVAWHL LNLLPLQRIA TTNSGELLSL TPVEHVCRLV RESSRVAAWR LGPSGLSTED
SRRISFHIRF NRPSSLFARC WLLVEGETET WVINELARQC GHHFDAEGIK VIEFAQSGLK
PLVKFARRMG IEWHVLVDGD EAGKKYAATV RSLLNNDREA EREHLTALPA LDMEHFMYRQ
GFSDVFHRMA QIPENVPMNL RKIISKAIHR SSKPDLAIEV AMEAGRRGVD SVPTLLKKMF
SRVLWLARGR AD
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