Gene Avin_51900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_51900 
SymbolglmR 
ID7764027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp5291096 
End bp5291860 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content69% 
IMG OID643808006 
Producttranscriptional regualtory protein, GlmR, DeoR family 
Protein accessionYP_002802240 
Protein GI226947167 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1349] Transcriptional regulators of sugar metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAAGC GAAACACACC GCAACGCCGC CATGCCATCC TCGCCCTGCT CGCCGAACGG 
GGCGAAGTCA GCGTCGACGA ACTGGCCAGA CGCTTCGAGA CCTCGGAGGT CACCATTCGC
AAGGACCTCG CCGCCCTGGA GAAGAACGGC CTGCTGCTGC GCCGCTACGG TGGCGCGGTG
CCGCTGCCGC AGGATCTGGC CGAGGACCGC CCGCTGTCCG CCGGCAAGCA GGCGATCGCC
AGGGCCGCCG CCGCGCGCAT CCGCGAGCAC GCGCGGATCA TCGTCGACAG CGGCAGCACC
ACCGCGGCGA TGATTCCCGA ACTGGCGCAC AAGCGCGGGC TGGTGGTGAT GACCAACTCC
CTCGACGTGG CCAACGCCCT GCGCGAGCTG GAGAACGAGC CGGTGCTGCT GATGACCGGC
GGCACCTGGG ACCCGCATTC GGAATCCTTC CAGGGCCAGG TCGCCGAGCA GGTGCTGCGC
TCCTACGACT TCGACCAGTT GTTCATCGGC GCCGACGGCA TCGACCTGGC GCGTGGCACC
ACCACCTTCA ACGAGCTGCT CGGCCTGTCC AGGGTCATGG CCGAGGTCGC CCGGGAAGTC
GTCGTCATGG TCGAGTCCGA CAAGGTCGGC CGGCGGATTC CCAACCTGGA GCTGCCCTGG
AGCAGCATCC ATACCCTGAT CACCGACGAG CGCCTCCCGC CCGAGGCGCG CGGACAGATC
GCGGCGCATG GCGTGGAACT GGTCTGCGTC GCCGTACCCG CCTGA
 
Protein sequence
MSKRNTPQRR HAILALLAER GEVSVDELAR RFETSEVTIR KDLAALEKNG LLLRRYGGAV 
PLPQDLAEDR PLSAGKQAIA RAAAARIREH ARIIVDSGST TAAMIPELAH KRGLVVMTNS
LDVANALREL ENEPVLLMTG GTWDPHSESF QGQVAEQVLR SYDFDQLFIG ADGIDLARGT
TTFNELLGLS RVMAEVAREV VVMVESDKVG RRIPNLELPW SSIHTLITDE RLPPEARGQI
AAHGVELVCV AVPA