Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_51900 |
Symbol | glmR |
ID | 7764027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 5291096 |
End bp | 5291860 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643808006 |
Product | transcriptional regualtory protein, GlmR, DeoR family |
Protein accession | YP_002802240 |
Protein GI | 226947167 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGAAGC GAAACACACC GCAACGCCGC CATGCCATCC TCGCCCTGCT CGCCGAACGG GGCGAAGTCA GCGTCGACGA ACTGGCCAGA CGCTTCGAGA CCTCGGAGGT CACCATTCGC AAGGACCTCG CCGCCCTGGA GAAGAACGGC CTGCTGCTGC GCCGCTACGG TGGCGCGGTG CCGCTGCCGC AGGATCTGGC CGAGGACCGC CCGCTGTCCG CCGGCAAGCA GGCGATCGCC AGGGCCGCCG CCGCGCGCAT CCGCGAGCAC GCGCGGATCA TCGTCGACAG CGGCAGCACC ACCGCGGCGA TGATTCCCGA ACTGGCGCAC AAGCGCGGGC TGGTGGTGAT GACCAACTCC CTCGACGTGG CCAACGCCCT GCGCGAGCTG GAGAACGAGC CGGTGCTGCT GATGACCGGC GGCACCTGGG ACCCGCATTC GGAATCCTTC CAGGGCCAGG TCGCCGAGCA GGTGCTGCGC TCCTACGACT TCGACCAGTT GTTCATCGGC GCCGACGGCA TCGACCTGGC GCGTGGCACC ACCACCTTCA ACGAGCTGCT CGGCCTGTCC AGGGTCATGG CCGAGGTCGC CCGGGAAGTC GTCGTCATGG TCGAGTCCGA CAAGGTCGGC CGGCGGATTC CCAACCTGGA GCTGCCCTGG AGCAGCATCC ATACCCTGAT CACCGACGAG CGCCTCCCGC CCGAGGCGCG CGGACAGATC GCGGCGCATG GCGTGGAACT GGTCTGCGTC GCCGTACCCG CCTGA
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Protein sequence | MSKRNTPQRR HAILALLAER GEVSVDELAR RFETSEVTIR KDLAALEKNG LLLRRYGGAV PLPQDLAEDR PLSAGKQAIA RAAAARIREH ARIIVDSGST TAAMIPELAH KRGLVVMTNS LDVANALREL ENEPVLLMTG GTWDPHSESF QGQVAEQVLR SYDFDQLFIG ADGIDLARGT TTFNELLGLS RVMAEVAREV VVMVESDKVG RRIPNLELPW SSIHTLITDE RLPPEARGQI AAHGVELVCV AVPA
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