Gene Avin_51760 details

Gene Information

• Locus tag: Avin_51760
• ID: 7764014
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: +
• Start bp: 5270605
• End bp: 5271222
• Gene Length: 618 bp
• Protein Length: 205 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 643807993
• Product: hemolysin III
• Protein accession: YP_002802227
• Protein GI: 226947154
• COG category: [R] General function prediction only
• COG ID: [COG1272] Predicted membrane protein, hemolysin III homolog
• TIGRFAM ID: [TIGR01065] channel protein, hemolysin III family

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTATCACG GTGAAAGGTT CAACGCCTGG ACTCATCTGG TCGGTGCGAT CCTGGCCCTG 
GTCGGCATGA TCTGGCTGCT GGTGGTGGCG AGCCTCGACG GCACGCCACA GAAGATCGTC 
GCCAGTGCGA TCTACGGCGT CACCCTGCTC TCGCTCTACA TCATCTCGAC CATCTACCAC 
AGCCTGCGCG GACGGGCGAA GACGATCCTG CGCAAGCTCG ATCACCTTTC CATCTACCTG 
CTGATCGCCG GCAGCTACAC GCCCTTCTGC CTGGTGACCC TGCCCGATGC CTGGGGCTGG 
TCGCTGCTGG CGATCATCTG GGGCCTGGCG CTGTTCGGCA TGCTGCAGGA GTTCAAGCAG 
CAGTCCGAGG CGCGGATTCT CTCGCTGGTG ATCTACGCGG TGATGGGCTG GCTGATTCTG 
GTGGCGGTCA AGCCGCTGCT CGCCAGCCTG GGCAGCGCGG GCTTCGCCTG GCTGCTGGCG 
GGCGGGATCG TCTACACCGT GGGCATCGTC TTCTTCGCCT TCGACGAACG TTTCCGCCAC 
TGGCACGGCA TCTGGCACCT GTTCGTCATG GCCGGCAGCC TGCTGCATTT CGTGACGATC 
TTCTTTTATG TGGTGTGA 

 

Protein sequence

MYHGERFNAW THLVGAILAL VGMIWLLVVA SLDGTPQKIV ASAIYGVTLL SLYIISTIYH 
SLRGRAKTIL RKLDHLSIYL LIAGSYTPFC LVTLPDAWGW SLLAIIWGLA LFGMLQEFKQ 
QSEARILSLV IYAVMGWLIL VAVKPLLASL GSAGFAWLLA GGIVYTVGIV FFAFDERFRH 
WHGIWHLFVM AGSLLHFVTI FFYVV