Gene Avin_50970 details

Gene Information

• Locus tag: Avin_50970
• Symbol: rnfB1
• ID: 7763945
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Azotobacter vinelandii DJ
• Kingdom: Bacteria
• Replicon accession: NC_012560
• Strand: -
• Start bp: 5167010
• End bp: 5167534
• Gene Length: 525 bp
• Protein Length: 174 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 643807925
• Product: Electron transport complex, RnfABCDGE type, B subunit
• Protein accession: YP_002802159
• Protein GI: 226947086
• COG category: [C] Energy production and conversion
• COG ID: [COG2878] Predicted NADH:ubiquinone oxidoreductase, subunit RnfB
• TIGRFAM ID: [TIGR01944] electron transport complex, RnfABCDGE type, B subunit

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.0817561
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATAGAGG CAACTCTGGC TCTGACCGTG ATGGGTGTGC TCCTGGGCTG CGGCCTCGGT 
CTGGCGGCAC GCAAGTTCGC GGTGACCGAC GAAAATCCCC TGATCAAGGA AGTCAGCGAT 
CTGATGCCGG GCAGCCAGTG CGGACAGTGC GGCTTTCCCG GCTGCGGTGC CGCCGCCGTG 
GCGATCGTCG AAGGCAATGC TTCGGTCACT TGCTGCCCGC CCGGCGGCGT GGGCCTGGCC 
GAGAAGCTCG CCGCGATCCT CGGCGTGCCC CTGGATGCCA GCCAGGTGGC CGCGCCCATG 
CTGGCGCGGG TGGAGGCCTC GCAGTGCATC GGCTGCACCC GCTGCTACCG TGCCTGCCCC 
ACCGACGCCA TCGTCGGCGC CAGCGGGCAG GTCCACGTGG TGCTGGAGGA TGCCTGCACC 
GGTTGCGGCA AGTGCCGCGA CGCCTGTCCG GAAGACTGCG TCCTTCTGAT CCCGCAGGAG 
CAGACCCTGG ACACCTGGCG CTGGGACAAG CCCGCTGCCG CCTGA 

 

Protein sequence

MIEATLALTV MGVLLGCGLG LAARKFAVTD ENPLIKEVSD LMPGSQCGQC GFPGCGAAAV 
AIVEGNASVT CCPPGGVGLA EKLAAILGVP LDASQVAAPM LARVEASQCI GCTRCYRACP 
TDAIVGASGQ VHVVLEDACT GCGKCRDACP EDCVLLIPQE QTLDTWRWDK PAAA