Gene Avin_50390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_50390 
Symbol 
ID7763888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp5108337 
End bp5109077 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content69% 
IMG OID643807868 
ProductDUF81 family membrane protein 
Protein accessionYP_002802102 
Protein GI226947029 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.599192 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGTCCA CGGAACTCCT TCTCGTCGCC GTACCGGCAG TACTGCTGAC CGGCCTCTCC 
AAGGGCGGTT TCGGCGGGGC CTTCGGTGGC ATCGCGGTAC CCCTGCTGGC CCTGGCGGTA
CCGCCCACCC AGGCCGCGGC GATCATGCTG CCGATCCTCT GCACCGCCGA TCTGGTCGGC
CTGCGTGCCT ACTACGGCAA GTGGGACGCG GCGAACCTGA GGATCATGCT GCCCGGCGCG
CTGCTCGGGG TGCTGCTCGG CTCGCTGAGC TTCGGCATGC TCGACGAGCG GATCATCGCC
CTGCTGATCG GCGGCATCGC CGTGGCCTTC GTGCTACTCA ACCTGCTGCG CCCGCCGGCC
GGCACGGCCG GGTTGCCGCC AGCGCGCGGC AAGGGCACGG CACTCTCCGC GCTGGCCGGC
TTCACCAGCT TCGTCGCCCA TGCCGGCGGC CCGCCGGCGA TGATGCACCT GCTGCCGCAG
CAGTTGGACA AGGTGCGCTA CGTCGCCACC ATCAACGTCT TCTTCCTGCT GACCAACGCG
ATCAAGCTGC TGCCGTACGC ACTGCTTGGC CAGTTCTCCG GCGACAACCT GCTGACCAGC
CTGTTCCTCG CCCCCCTGGT TCCGCTGGGC GTGTGGGCCG GACTCTGGCT GCAGGAGCGA
GTCGATCACC TGTGGTTCTA CCGCATCGCC CGCGCCGGCC TGCTGCTCGC CGGCATCCAG
TTGATCCTGC AGAACCTCTG A
 
Protein sequence
MLSTELLLVA VPAVLLTGLS KGGFGGAFGG IAVPLLALAV PPTQAAAIML PILCTADLVG 
LRAYYGKWDA ANLRIMLPGA LLGVLLGSLS FGMLDERIIA LLIGGIAVAF VLLNLLRPPA
GTAGLPPARG KGTALSALAG FTSFVAHAGG PPAMMHLLPQ QLDKVRYVAT INVFFLLTNA
IKLLPYALLG QFSGDNLLTS LFLAPLVPLG VWAGLWLQER VDHLWFYRIA RAGLLLAGIQ
LILQNL