Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_49080 |
Symbol | gabD |
ID | 7763766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 4968374 |
End bp | 4969825 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643807747 |
Product | succinate-semialdehyde dehydrogenase I |
Protein accession | YP_002801982 |
Protein GI | 226946909 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.133526 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACTGA ACGATGCCCG GCTGTTCCGC CAACAGGCTT ACATCGAGGG TCGCTGGGTG GATGCCGACG GCGGGCAGAC CCTCGCGGTG AACAATCCGG CCAGCAACGA GATCCTCGGC GGCGTGCCGA AAATGGGCGC GGCGGAGACC CGCCGCGCCA TCGAGGCCGC CGAGCGGGCG CTGCTGGCCT GGCGCGCGCT GACCGCCAAG GAGCGCGCGG GCAAGCTGCG GTGCTGGTTC GAACTGCTGC TCGAGCATCA GGACGACCTG GCCCGGCTGA TGACCCTGGA GCAGGGCAAG CCGCTGGCCG AGGCGCGCGG CGAGATCGCC TATGCCGCCT CCTTCCTCGA ATGGTTCGCC GAGGAGGCCA AGCGCATCTA CGGCGACACC ATCCCCGGCC ACCAGGCGGA CAAGCGCATC CTGGTGATCA AGCAGCCGGT CGGCGTCTGC GCGGCCATCA CGCCATGGAA CTTCCCGGCG GCGATGATCA CCCGCAAGGC CGGCCCGTCA CTGGCCGCCG GCTGCACCCT GGTGCTCAAG CCGGCCTCGC AGACGCCCTT CTCGGCGCTG GCGCTGGCCG AGCTGGCCGA GCGCGCCGGC ATTCCGGCGG GGGTATTCAA CGTGGTCACC GGCAGCGCCG CCGAGATCGG CGGCGAACTG ACCGCCAACC CGATCGTACG CAAGCTGTCC TTCACCGGCT CCACCGAGAT CGGCCGCCAG TTGATGGCCC AGTGCGCCAG GGACATCAAG AAGGTTTCCC TGGAACTGGG CGGCAACGCA CCCTTCATCG TCTTCGACGA CGCCGATCTG GACGCGGCGG TGGAGGGCGC GCTGGCTTCG AAATACCGCA ACGCCGGGCA GACCTGCGTG TGCGCCAACC GCCTGTACGT GCAGGACGGC GTGTACGACG CCTTCGCCGA GAAGCTCAGG GCCGCGGTGG CGCGCCTGAA GGTCGGCAAC GGCCTGGAGG AAGGGGTGAG CATCGGTCCG TTGATCGACG ACAAGGCGGT GGGCAAGGTC GAGGAACACA TCGCCGATGC GGTTTCCCGC GGCGCCAGGG TGATCGCCGG CGGTCGGCCC CACGCGCTCG GTGGCACCTT TTTCGAACCG ACCATTCTCG CCGAGGTGCC GGCGGATGCG CGGGTCGCCC GCGAGGAGAC CTTCGGGCCG CTGGCCCCGC TGTTCCGCTT CGGGGACGAC GACGAGGCGA TCGCCCTGGC CAATGCCACC GAGTTCGGTC TGGCCGCCTA TTTCTACGCC CGCGACCTGT CCCGGGTATT CCGCGTGGCC GAGTCGCTGG AATACGGCAT CGTCGGCGTC AACACCGGGC TGATCTCCAC CGAGGTGGCG CCGTTCGGCG GGGTCAAGGC CTCGGGCCTG GGCCGCGAGG GCTCCAAGTA CGGTATCGAG GACTATCTGG AGATCAAGTA TCTCTGCCTC GGCGGTATCT GA
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Protein sequence | MQLNDARLFR QQAYIEGRWV DADGGQTLAV NNPASNEILG GVPKMGAAET RRAIEAAERA LLAWRALTAK ERAGKLRCWF ELLLEHQDDL ARLMTLEQGK PLAEARGEIA YAASFLEWFA EEAKRIYGDT IPGHQADKRI LVIKQPVGVC AAITPWNFPA AMITRKAGPS LAAGCTLVLK PASQTPFSAL ALAELAERAG IPAGVFNVVT GSAAEIGGEL TANPIVRKLS FTGSTEIGRQ LMAQCARDIK KVSLELGGNA PFIVFDDADL DAAVEGALAS KYRNAGQTCV CANRLYVQDG VYDAFAEKLR AAVARLKVGN GLEEGVSIGP LIDDKAVGKV EEHIADAVSR GARVIAGGRP HALGGTFFEP TILAEVPADA RVAREETFGP LAPLFRFGDD DEAIALANAT EFGLAAYFYA RDLSRVFRVA ESLEYGIVGV NTGLISTEVA PFGGVKASGL GREGSKYGIE DYLEIKYLCL GGI
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