| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_49000 |
|---|
| Symbol | nifH |
|---|
| ID | 7763759 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 4960227 |
|---|
| End bp | 4961054 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643807740 |
|---|
| Product | nitrogenase reductase |
|---|
| Protein accession | YP_002801975 |
|---|
| Protein GI | 226946902 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1348] Nitrogenase subunit NifH (ATPase) |
|---|
| TIGRFAM ID | [TIGR01287] nitrogenase iron protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTCGTA AAGTAGCCAT TTACGGAAAA GGCGGTATCG GCAAATCCAC CACTACCCAG
AATACTGCCG CAGCGCTGGC CTATTTCCAC GACAAGAAAG TCTTCATCCA CGGCTGCGAC
CCCAAGGCGG ACTCCACCCG CCTGATTCTC GGCGGCAAAC CTCAGGAAAC CCTGATGGAC
ATGCTGCGCG ACAAGGGCGC CGAAAAGATC ACCAACGACG ACGTGATCAA AAAAGGCTTT
CTGGACATCC AGTGCGTGGA GTCCGGCGGC CCCGAGCCGG GCGTTGGTTG CGCTGGCCGC
GGCGTGATCA CCGCCATCGA CCTGATGGAA GAAAACGGCG CCTATACCGA TGACCTGGAT
TTCGTGTTCT TCGACGTACT GGGCGACGTC GTGTGCGGCG GTTTCGCCAT GCCGATCCGC
GACGGCAAGG CCCAGGAAGT CTACATCGTG GCTTCCGGGG AGATGATGGC CATTTATGCG
GCCAACAACA TCTGCAAGGG CCTGGTGAAA TACGCCAAAC AAAGTGGCGT GCGCCTGGGC
GGCATCATTT GCAACAGCCG TAAGGTGGAT GGCGAGCGCG AGTTCCTGGA AGAGTTCACC
GCGGCCATCG GTACCAAGAT GATCCACTTC GTTCCGCGCG ACAATATCGT GCAGAAGGCC
GAGTTCAACA AGAAGACCGT GACCGAGTTC GCTCCAGAGG AAAACCAGGC CAAGGAGTAC
GGCGAGCTGG CCCGCAAGAT CATTGAGAAC GATGAATTCG TCATTCCCAA ACCGCTGACC
ATGGACCAAC TGGAAGACAT GGTCGTCAAG TACGGTATTG CCGACTGA
|
|---|
| Protein sequence | MTRKVAIYGK GGIGKSTTTQ NTAAALAYFH DKKVFIHGCD PKADSTRLIL GGKPQETLMD
MLRDKGAEKI TNDDVIKKGF LDIQCVESGG PEPGVGCAGR GVITAIDLME ENGAYTDDLD
FVFFDVLGDV VCGGFAMPIR DGKAQEVYIV ASGEMMAIYA ANNICKGLVK YAKQSGVRLG
GIICNSRKVD GEREFLEEFT AAIGTKMIHF VPRDNIVQKA EFNKKTVTEF APEENQAKEY
GELARKIIEN DEFVIPKPLT MDQLEDMVVK YGIAD
|
|---|
| |