| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_48160 |
|---|
| Symbol | |
|---|
| ID | 7763678 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 4881389 |
|---|
| End bp | 4882771 |
|---|
| Gene Length | 1383 bp |
|---|
| Protein Length | 460 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643807660 |
|---|
| Product | Aminotransferase protein |
|---|
| Protein accession | YP_002801895 |
|---|
| Protein GI | 226946822 |
|---|
| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCAGC GCCAAACACG CATCAATGTC GTCATGGAGG CGATCCGCTC GAGAATTGCC
TCCCGCTCCT ATCCGCCGGG CACGCGCCTG CCGTCCGTGC GCGCGCAAGC CAAGGCGATG
GGAGTTTCGG TATCCACAGT GGTGGAAGCC TACGAGCGGT TGGCTGCCGA GGAAGTCATC
TGCGCACGTC CCGGCTCCGG GTTCTACGTC TGCGGGCCTG TCGCCCCCTT GGCTCTGTCG
GAGATCGGGC CGCCGCTGGA TCGGGAGGTC GATCCGCTGT GGGTTTCGCG TCAGTCGCTA
GAGGCGGGCG CGTCCCTGCT CAAGCCCGGT TGTGGCTGGC TTCCAGCCGC GTGGATGTAT
GAGGCGGGAA TGCGCCGGGC ATTGCGGGCG ACCGCAAGAG CCGACGCCGC GGTGCTTTCC
GACTATGCCA CACCGCTGGG TTTGCCGGCG CTGCGCCAGC TTCTCGCCCG ACGCATGGCC
GCCGCGGACA TTGAGGCACG GCCCGAACAG CTCATGCTGA CCGAATCCGG CACTCAGGCC
ATCGACCTGA TCTGCCGCTT CTTCCTAGAG GCGGGAGACA CCGTACTGGT CGATGATCCC
TGCTACTTCA ACTTCCACGC CTTGCTGCGG GCGCATCGCG TGAAGACAGT GAGCGTGCCG
TTCACCCCGA ACGGGCCGGA CGTGGAGGCG TTCGAGGCCG CCTTGCGCGA GCATTCGCCA
CGTCTCTACA TCACCAACTC GGGCATCCAT AACCCGACAG GCGCGACGCT TTCCCCAGTC
ATCGCACACC GGCTCCTGAA GCTGGCCGAC AACACGAATC TCGTCATCGT CGAAGATGAC
ATCTTCGCGG ATTTCGAGGT CAGCCCGGCA CCGCGCTTGG CTGCTTTCGA CGGTCTTTCG
CGGGTGATTC ACATCGGCAG CTTTTCCAAG ACCATTTCGG CCTCGCTGCG CTGCGGCTAT
GTCGCCGCGC GCGCCGACTG GATCGACCGC TTGGCCGACC TCAAGATCGC GACCAGCTTC
GGAGGTGGCC AACTGGCTTC TGCCATCCTG CTGGCCGCAT TGACCGACAG TGGATACCGC
AAGCACATGG AGGGCGTTCG CATCCGTCTG GCCGAGGCAA GGAACAAGAC CATAGTCCGT
CTCGATGCGA TAGGCATCAC ACCCTGGATC ATTCCGCAGG CGGGCATGTT CATCTGGTGC
CGATTGCCCC GAGGCATCGA TGCGGCGGAT GTCGCTCGGT CCTGCCTGAG GGAAGGAGTG
GTACTGGCTC CCGGCAATGT CTTCAGCCAA TCGCAGGACG CGAGTGGCTT CCTGCGTTTC
AATGCCGCGC AATCCATGGA CGTACGGGTG TTCGACACCC TGGCGAGGGT CTTGCCTGCT
TAG
|
|---|
| Protein sequence | MSQRQTRINV VMEAIRSRIA SRSYPPGTRL PSVRAQAKAM GVSVSTVVEA YERLAAEEVI
CARPGSGFYV CGPVAPLALS EIGPPLDREV DPLWVSRQSL EAGASLLKPG CGWLPAAWMY
EAGMRRALRA TARADAAVLS DYATPLGLPA LRQLLARRMA AADIEARPEQ LMLTESGTQA
IDLICRFFLE AGDTVLVDDP CYFNFHALLR AHRVKTVSVP FTPNGPDVEA FEAALREHSP
RLYITNSGIH NPTGATLSPV IAHRLLKLAD NTNLVIVEDD IFADFEVSPA PRLAAFDGLS
RVIHIGSFSK TISASLRCGY VAARADWIDR LADLKIATSF GGGQLASAIL LAALTDSGYR
KHMEGVRIRL AEARNKTIVR LDAIGITPWI IPQAGMFIWC RLPRGIDAAD VARSCLREGV
VLAPGNVFSQ SQDASGFLRF NAAQSMDVRV FDTLARVLPA
|
|---|
| |