Gene Avin_47730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_47730 
SymbolxerC 
ID7763635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4842584 
End bp4843483 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content71% 
IMG OID643807617 
Productsite-specific tyrosine recombinase XerC 
Protein accessionYP_002801852 
Protein GI226946779 
COG category[L] Replication, recombination and repair 
COG ID[COG4973] Site-specific recombinase XerC 
TIGRFAM ID[TIGR02224] tyrosine recombinase XerC 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0435757 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGCCG ATCTCGACGC CTTCCTCGAC CACCTGCGCA ACGAGCGCCA GGTGTCGCAG 
CATACCCTCG ACGGTTACCG CCGCGACCTC GCCAAGGTTC ACGCCCATTG CGAACGGGAA
GGACTGGACG CCTGGAGCGC GCTGGACGCC GGCCGTCTGC GCCGGCTGAT CGCCAGGCTG
CACCTGCAGG GTCACTCCAG CCGCAGTCTG GCGCGCCTGC TCTCGGCGCT GCGCGGCTTC
TACCGCTACC TGCTGCGCGA GGGCCGCTGC CGGCACGATC CCGCCGCCGG CCTGAGTCCG
CCCAAGGGCG AGCGCCGGCT GCCGCGCACC CTGGACGCCG ACCGCACCCA GCAATTGCTC
GACGGCGCCG TCGAGGACGA CTTCATCGCC CGCCGCGACC AGGCCATGCT CGAACTCTTC
TACTCTTCCG GCCTGCGCCT TTCGGAACTG GTCGGCCTGG ACTTGGATCG CCTCGACCTG
GCCGCCGGCC TGGTGCGGGT GCACGGCAAG GGCAACAAGG CCCGCGACCT GCCGATCGGC
AGCAAGGCGC GCGAGGCGCT GCGGGCCTGG CTGTCCTTGC GGGCACAGGC GCGTCCGGCC
GACGGCGCCC TGTTCGTCGG CCGCACGGGG CGCCGCCTGA CCCCGCGCGC CGTACAGTTG
CGGGTACGCC AGGCCGGCGT GCGCGAACTC GGCCAGCATC TGCATCCGCA CATGCTGCGC
CACAGCTTCG CCAGCCATCT GCTGGAGTCC TCCCAGGACC TGCGCGCCGT GCAGGAACTG
CTCGGCCATG CCGATATCGC CACTACCCAG ATCTATACCC ATCTCGATTT CCAGCACCTG
GCGGCGGTCT ACGACCAGGC CCATCCGCGG GCGCGCCGTC GCAAGGACGA CACCTCATGA
 
Protein sequence
MQADLDAFLD HLRNERQVSQ HTLDGYRRDL AKVHAHCERE GLDAWSALDA GRLRRLIARL 
HLQGHSSRSL ARLLSALRGF YRYLLREGRC RHDPAAGLSP PKGERRLPRT LDADRTQQLL
DGAVEDDFIA RRDQAMLELF YSSGLRLSEL VGLDLDRLDL AAGLVRVHGK GNKARDLPIG
SKAREALRAW LSLRAQARPA DGALFVGRTG RRLTPRAVQL RVRQAGVREL GQHLHPHMLR
HSFASHLLES SQDLRAVQEL LGHADIATTQ IYTHLDFQHL AAVYDQAHPR ARRRKDDTS