Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_47730 |
Symbol | xerC |
ID | 7763635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 4842584 |
End bp | 4843483 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643807617 |
Product | site-specific tyrosine recombinase XerC |
Protein accession | YP_002801852 |
Protein GI | 226946779 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4973] Site-specific recombinase XerC |
TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0435757 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGGCCG ATCTCGACGC CTTCCTCGAC CACCTGCGCA ACGAGCGCCA GGTGTCGCAG CATACCCTCG ACGGTTACCG CCGCGACCTC GCCAAGGTTC ACGCCCATTG CGAACGGGAA GGACTGGACG CCTGGAGCGC GCTGGACGCC GGCCGTCTGC GCCGGCTGAT CGCCAGGCTG CACCTGCAGG GTCACTCCAG CCGCAGTCTG GCGCGCCTGC TCTCGGCGCT GCGCGGCTTC TACCGCTACC TGCTGCGCGA GGGCCGCTGC CGGCACGATC CCGCCGCCGG CCTGAGTCCG CCCAAGGGCG AGCGCCGGCT GCCGCGCACC CTGGACGCCG ACCGCACCCA GCAATTGCTC GACGGCGCCG TCGAGGACGA CTTCATCGCC CGCCGCGACC AGGCCATGCT CGAACTCTTC TACTCTTCCG GCCTGCGCCT TTCGGAACTG GTCGGCCTGG ACTTGGATCG CCTCGACCTG GCCGCCGGCC TGGTGCGGGT GCACGGCAAG GGCAACAAGG CCCGCGACCT GCCGATCGGC AGCAAGGCGC GCGAGGCGCT GCGGGCCTGG CTGTCCTTGC GGGCACAGGC GCGTCCGGCC GACGGCGCCC TGTTCGTCGG CCGCACGGGG CGCCGCCTGA CCCCGCGCGC CGTACAGTTG CGGGTACGCC AGGCCGGCGT GCGCGAACTC GGCCAGCATC TGCATCCGCA CATGCTGCGC CACAGCTTCG CCAGCCATCT GCTGGAGTCC TCCCAGGACC TGCGCGCCGT GCAGGAACTG CTCGGCCATG CCGATATCGC CACTACCCAG ATCTATACCC ATCTCGATTT CCAGCACCTG GCGGCGGTCT ACGACCAGGC CCATCCGCGG GCGCGCCGTC GCAAGGACGA CACCTCATGA
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Protein sequence | MQADLDAFLD HLRNERQVSQ HTLDGYRRDL AKVHAHCERE GLDAWSALDA GRLRRLIARL HLQGHSSRSL ARLLSALRGF YRYLLREGRC RHDPAAGLSP PKGERRLPRT LDADRTQQLL DGAVEDDFIA RRDQAMLELF YSSGLRLSEL VGLDLDRLDL AAGLVRVHGK GNKARDLPIG SKAREALRAW LSLRAQARPA DGALFVGRTG RRLTPRAVQL RVRQAGVREL GQHLHPHMLR HSFASHLLES SQDLRAVQEL LGHADIATTQ IYTHLDFQHL AAVYDQAHPR ARRRKDDTS
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