Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_47590 |
Symbol | hemD |
ID | 7763622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 4832966 |
End bp | 4833754 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643807604 |
Product | uroporphyrinogen-III synthase |
Protein accession | YP_002801839 |
Protein GI | 226946766 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1587] Uroporphyrinogen-III synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACGGTAC GGTCGGACGC CGGCGGGTGG CGCCTGCTGC TCACCCGTCC GGCCGAGGAA TGCGCCGTTC TGGCCGATTG CCTGAGCGAG GCGGGCATCT GCAGCAGCAG CCTGCCGCTG CTGGCCATCG AGCCGCTGGC GGAAGCCCCG GAACTGCGCA GCCTCTTTCT CGATCTCGAC CGCTACAGCG CGGTGATCGT GGTCAGCAAG CCCGCCGCTC GCCTGGGGCT GGAGCTGCTC GACCGCTACT GGCCGCAGCC GCCGGCCGAT CAATGCTGGT TCGGCGTCGG CCGGGCGACC GGCGAGATCC TCGCCGATTA CGGCCTGACG GTCGCCTGGC CGACCGCCGG CGAGGACAGC GAGGCGCTGC TGGCGCTGCC CGGACTGGCC ACGGCATTGG CCGTACCCCA GCCGCGGGTG CTGATCCTGC GCGGGGAGGG CGGTCGCGAG TTCATCGCCG AATCGTTGCG CAGTCGGGGG CTGGCCGTCG ATCATGTCGA ACTCTACCGG CGAACCCTGC CGGACTACCC GCCCGGCACC CTGCTCGAGC GGGTCCGCAC GGAGCGCCTG AACGGCCTGC AGATCAGCAG CGGGCAGGGA TTCGAGCATC TGCGCCAACT GGCGGCGGCT GACTGGCCGG CACTGCTTCG GATACCCTTG TTCGTGCCGA GCCCGCGGGT CGCCGAACTG GCCCGCGCGG CGGGATTCCG GACCGTCGTG GACTGCCATG GCGCCAGTGC CACTGCCTTG CTGGCCGCGC TTCAGGGCCG CCCAGCGCCG ACCTTTTGA
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Protein sequence | MTVRSDAGGW RLLLTRPAEE CAVLADCLSE AGICSSSLPL LAIEPLAEAP ELRSLFLDLD RYSAVIVVSK PAARLGLELL DRYWPQPPAD QCWFGVGRAT GEILADYGLT VAWPTAGEDS EALLALPGLA TALAVPQPRV LILRGEGGRE FIAESLRSRG LAVDHVELYR RTLPDYPPGT LLERVRTERL NGLQISSGQG FEHLRQLAAA DWPALLRIPL FVPSPRVAEL ARAAGFRTVV DCHGASATAL LAALQGRPAP TF
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