Gene Avin_47520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_47520 
Symbol 
ID7763615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4826071 
End bp4827972 
Gene Length1902 bp 
Protein Length633 aa 
Translation table11 
GC content68% 
IMG OID643807597 
ProductABC transporter , ATP-binding protein 
Protein accessionYP_002801832 
Protein GI226946759 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCGAC TCCAGCATCT TACCCTGCAA CGTGGTCCGC AGCGTCTGCT CGAGGACGCC 
GAGCTGACCC TGCACGCCGG CCAGAAGGCC GGCCTCATCG GTGCCAACGG CGCCGGCAAA
TCCACCCTGT TCGCTCTGCT GCGCGGCGAA CTCTCGCCCG ATGCCGGCGA CTGCCAGTTG
CCGGCGGACT GGCGCATCGC TCACATGCGT CAGGAGGTCG ACGACCTCGA ACGCCGGGCG
GTCGATTACG TGCTCGATGG CGATGCCGAG CTGCGGCGCA TCCAGCGCGA ACTGGCGGCG
GCGGAGTCGA GCCACGACGG TGTAGCCATC GCCCGCCTGC ACACCGAGCT GGACAATGCC
GACGGCTATA CGGCCGACGC CCGGGCGCGC AAGCTGCTGG CCGGGCTGGG CTTCGCCGCC
GAGCAGATGG AGCGTCGGGT CGGCGATTTC TCCGGTGGCT GGCGGATGCG CCTGAACCTG
GCGCAGGCGT TGATGTGTCC CTCCGACCTG CTGCTGCTCG ACGAGCCGAC CAACCACCTC
GACCTCGACG CCATCCTCTG GCTGGAAGAA TGGCTGAAGG GCTATCCCGG CACCCTGCTG
CTGATTTCCC ACGACCGCGA CTTCCTCGAT GCCGTGGTCG ATCATGTGGC GCATCTGGAG
CAGCGCAAGC TGACCCTCTA TCGCGGCGGC TACTCGGCCT TCGAGCGTAC CCGCGCCGAG
CGCCTGGCCC AGCAGCAGCA GGCCTACGAG AAGCAGCAGG CGCAACGCGC CCACATGGAG
AGCTTCATCC GCCGCTTCAA GGCCAAGGCG ACCAAGGCAC GCCAGGCGCA GAGCCGGATC
AAGGCGCTGG AGCGGCTGGA GGAGCTGGCG CCGGCGCACG TGGATTCGCC TTTCGATTTT
CGTTTTCGCG AGGCCGACAG GGTTTCCAGC CCGCTGCTCG ACCTGTCCGA AGGACGCCTC
GGCTACGGCG ACAAGGCCGT GCTGGAGAAG GTCAAGCTGC AGTTGGCGCC CGGCGCGCGC
ATCGGCCTGC TCGGCCCCAA TGGCGCCGGC AAGTCGACCC TGATCAAGAC CCTGGCCGGC
GAACTGCAGC CGCTGTCCGG GCGCCTCGCG CGTGGCGAGA ACCTGGTGGT CGGTTACTTC
GCCCAGCATC AGCTGGATGC CCTGGACGCC AAGGCCAGCC CGCTGCTGCA CCTGCAGCGC
ATCGCTTCCG GCGAGCGCGA GCAGACCCTG CGCGATTTTC TCGGCGGCTT CGATTTCCGC
GGTGCTCGCT GCGACGAGCC GGTGGGCAAT TTCTCCGGTG GCGAAAAGGC CCGGCTGGCC
CTGGCGCTGA TCGCCTGGGG CAAGCCCAAT CTCTTGTTGC TCGACGAACC GACCAACCAC
CTCGATCTGG AAATGCGCCT GGCCCTGACC CTGGCCTTGC AGGATTTCGA GGGGGCGGTG
CTGGTGGTTT CCCACGACCG CCATCTCCTG AAGAGCACCA CCGATGAGTT CCTGCTGGTC
GCCGACGGTC GCGTGCAGGG CTTCGACGGC GATCTCGAGG ACTACGCCCG CTGGCTGGTG
GATTATCGCG CCCGCCAGGC GCCGGTTACC CCGGCCGCCG AGCGCGTCGA CAAGCGCACC
CAGCGCCAGG CCGCTGCCGC CTTGCGCCAG CAGTTGGCAC CGCTTCGGCG GCAGGCCGAG
AAGCTGGAGC AGGAACTGGG CCGTGTGCAG GAAAAGCTCG CTGCCTTGGA GGTCCGGCTT
GGCGATAGCG CACTCTACGA GGCCGCGCGC AAGGACGAAC TGCGCCAGTT GCTGTCCGAA
CAGGCCACTC TCAAGAGTCG CGAGGGTGAA CTGGAGGAAG CCTGGCTGGA GGCCCTGGAA
GCCCTCGAGT CTCTGCAGGC TCGGCTGGAG GCCGATGCCT GA
 
Protein sequence
MIRLQHLTLQ RGPQRLLEDA ELTLHAGQKA GLIGANGAGK STLFALLRGE LSPDAGDCQL 
PADWRIAHMR QEVDDLERRA VDYVLDGDAE LRRIQRELAA AESSHDGVAI ARLHTELDNA
DGYTADARAR KLLAGLGFAA EQMERRVGDF SGGWRMRLNL AQALMCPSDL LLLDEPTNHL
DLDAILWLEE WLKGYPGTLL LISHDRDFLD AVVDHVAHLE QRKLTLYRGG YSAFERTRAE
RLAQQQQAYE KQQAQRAHME SFIRRFKAKA TKARQAQSRI KALERLEELA PAHVDSPFDF
RFREADRVSS PLLDLSEGRL GYGDKAVLEK VKLQLAPGAR IGLLGPNGAG KSTLIKTLAG
ELQPLSGRLA RGENLVVGYF AQHQLDALDA KASPLLHLQR IASGEREQTL RDFLGGFDFR
GARCDEPVGN FSGGEKARLA LALIAWGKPN LLLLDEPTNH LDLEMRLALT LALQDFEGAV
LVVSHDRHLL KSTTDEFLLV ADGRVQGFDG DLEDYARWLV DYRARQAPVT PAAERVDKRT
QRQAAAALRQ QLAPLRRQAE KLEQELGRVQ EKLAALEVRL GDSALYEAAR KDELRQLLSE
QATLKSREGE LEEAWLEALE ALESLQARLE ADA