| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_47310 |
|---|
| Symbol | ubiF |
|---|
| ID | 7763594 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 4804829 |
|---|
| End bp | 4806046 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643807576 |
|---|
| Product | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase |
|---|
| Protein accession | YP_002801811 |
|---|
| Protein GI | 226946738 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
|---|
| TIGRFAM ID | [TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACGCGG ATCTGATCAT CGTCGGCGCC GGAATGGTCG GCAGCGCCCT GGCGCTGGCC
CTGCAGGACA GCGGTCTGGA TATCCTGCTG CTGGACCGCG GGCCGCTCGA GGTGGCTCCC
TGGAATCCCG CGGCGCCCTT CGAGCCGCGG GTCAGCGCAC TGTCCGCCGC CAGCCAGCGC
ATCCTCGAGC GCCTCGGCGC CTGGGACGGC ATCCGCGCCC GGCGCGCCGC TCCCTACGGC
GAGATGCAGG TGTGGGACGG CTCCGGCACC GGGCGGATCC ACTTCTCGGC GGCCAGCGTG
CATGCCGAGG TACTCGGTCA CATCGTCGAG AACCGGGTGG TGCAGGATGC CCTGCTCGAG
TGCCTGGCCG GCAGTGGGGT CGGCCTGCTG CCCGGCATCC GCCTGGACGG ACTGCGCCGC
TCCGGCGACG GTTGGCTGGT CCGCCTGGGC GACGGCCGCC AGTTGCGCTC GCCGCTCCTG
GTCGCCGCCG ACGGCGCCAA CTCGACGATC CGTCGCCTGG CCGGCTGCGC CACCCGCGAA
TGGGATTACC TGCACCACGC CATCGTCACC AGCGTGCGTT GCGCCGAACC GCACCGCCGC
ACCGCCTGGC AGCGCTTCAC CGACGACGGG CCGCTGGCCT TCCTGCCGCT GGAGCGGGAC
GCCGACCGGC ACTGGTGCTC GATCGTCTGG TCGGTCACTC CGCAGCAGGC CGGGCGGCTG
ATGGCCCTAG ACGATGCGGC CTTCGCCAGG GCCCTGGGCG CTGCCTTCGA GTGGCGTCTC
GGCGAAGTGC TGGAGGTCGA TCCGCGACAC TGCATCCCGC TGCGCCAGCG GCATGCCCGG
CGCTACGTCG AGCCCGGCCT GGCGCTGATC GGCGATGCCG CCCATGTCAT CCATCCGCTG
GCGGGGCAGG GGGTCAACCT CGGTTTCCTC GATGCCGCGA CCCTGGCCGA AGCGCTGCTG
CAGGCCCGTT CGCGTGGCGA GCGACTGGCC GATCTGCGCG TGCTGAGCCG TTTCGAGCGC
CGGCGTATGC CCCACAACCT GGCGATGATG GCGGCGATGG AAGGCTTCGA GCGGCTGTTC
CAGGCCGATC CGTTGCCGCT GCGCTGGCTG CGCAACAGCG GCCTGAAGTG GATGGACAAT
CTGCCCGAGG GCAAGGCGCT GTTCGTCCGC CAGGCCCTCG GCTTGAGCGG CGACCTTCCA
GCGCTGGCGC GCGCCTGA
|
|---|
| Protein sequence | MHADLIIVGA GMVGSALALA LQDSGLDILL LDRGPLEVAP WNPAAPFEPR VSALSAASQR
ILERLGAWDG IRARRAAPYG EMQVWDGSGT GRIHFSAASV HAEVLGHIVE NRVVQDALLE
CLAGSGVGLL PGIRLDGLRR SGDGWLVRLG DGRQLRSPLL VAADGANSTI RRLAGCATRE
WDYLHHAIVT SVRCAEPHRR TAWQRFTDDG PLAFLPLERD ADRHWCSIVW SVTPQQAGRL
MALDDAAFAR ALGAAFEWRL GEVLEVDPRH CIPLRQRHAR RYVEPGLALI GDAAHVIHPL
AGQGVNLGFL DAATLAEALL QARSRGERLA DLRVLSRFER RRMPHNLAMM AAMEGFERLF
QADPLPLRWL RNSGLKWMDN LPEGKALFVR QALGLSGDLP ALARA
|
|---|
| |