Gene Avin_47200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_47200 
Symbol 
ID7763583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4793035 
End bp4793622 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content69% 
IMG OID643807565 
Producthypothetical protein 
Protein accessionYP_002801800 
Protein GI226946727 
COG category[R] General function prediction only 
COG ID[COG5516] Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCGA AACCTGGCGA TACTCCGGCC GAGCCCTATG TCCTGGCCGA TCATCCGGTG 
CTCGACATGC TGAATACCGT GGCTCGCGTC GACGGTGTTC CCCATGACTT CTGGCAATCC
GACGCGGACG TGCTGCGCTG GCTGGAACGC CTGGGAATGG CCGCCGCGGG CGAGGCGCCG
AGCCTGCCGG CAGGGGCCTT GCTGGCAACG GCGCGGGCGT TGCGCGAAGT CGTCCGCGAT
CTGGTCGAGC GGCGCAAGAA CGGCGAGCCC GGCGATCCGA CCGAGCTGAA CCGCTTCCTG
GCGCAGGCCG CCAGCTACCG CCAGGTACGC TGGGATGGCG ATGCAGGTCC GCGGCTGGAG
ACCGTCGGCG AACGCAAGTC CGCCGCCCAG TTCCTGGCGC CCCTGGCCGA GCGGGCGGCT
GAGCTGCTGT GCGAGGGCGA CTTCTCGCTG ATACGGGTCT GCGAGCACCC GCAGTGCATC
CTCTGGTTCT ACGACCGCAC CAAGGCCCAT CGCCGGCGCT GGTGCAGCAT GGCGCTCTGC
GGAAACCGCG CCAAGGTGGC CGAGTTCCGC AAGCGCAAGC AGAAGTGA
 
Protein sequence
MTAKPGDTPA EPYVLADHPV LDMLNTVARV DGVPHDFWQS DADVLRWLER LGMAAAGEAP 
SLPAGALLAT ARALREVVRD LVERRKNGEP GDPTELNRFL AQAASYRQVR WDGDAGPRLE
TVGERKSAAQ FLAPLAERAA ELLCEGDFSL IRVCEHPQCI LWFYDRTKAH RRRWCSMALC
GNRAKVAEFR KRKQK