Gene Avin_46550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_46550 
Symbol 
ID7763518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4727015 
End bp4727818 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content73% 
IMG OID643807499 
Productresponse regulator 
Protein accessionYP_002801735 
Protein GI226946662 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0203573 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCGAC CGGGCGGCGA GAACGGCGCC TGCGTCACCC TCGCACGGCA ACCGACGGGA 
GAAACGAAGA TGGGCGAAGC CCTGGCGAGA ATTCTGGTGG TCGACGACGA GCAGGACCTG
CGCGCCCTGC TGCAACGCTA TCTCAGCGAC CAGGGCTATG CGGTCCGCGC CCTGGACGGC
GGCCAGCACC TGGAGCGCCT GCTCGGCCGC GAGCGCTTCG ACGTGCTGGT GCTCGACGTG
ATGATGCCCG GCGAGGACGG CCTGTCCCTG TGCCGGCGCC TGCGCGCGCG GGGCGAGACC
ATTCCCATCG TCATGCTCAC CGCCCGCGGC GATCCGCTGG ACCGCATCAT CGGCCTGGAG
ATGGGCGCCG ACGACTACCT GCCCAAGCCT TTCAATCCGC GCGAGCTGCA GGCGCGCATC
GAAGCGCTGA TCCGCCGCCA GCGCATGCTC GGCGCCCACA CCGGCCCGTT GCCGGGCGAC
GGGCGGATCG ACTTCGGCCC CTTCAGCCTG CACCTCGGCG AACGCCGCCT GCGCCGCGAC
GGCGGCGACA TCCCGCTGAC CAGCGGCGAG TTCGCCCTGC TCCAGGCCCT GGCCCGCCAC
CCCGGGCGGC CGCTCGGCCG CGACCGGCTG ATCGAGCTGA GCCGCGGCCG CGACCACGAG
GCCAGCGACC GCAGCATCGA CGTGCAGGTC ATGCGCCTGC GCCGGGCGAT CGAGGACGAC
CCGGCGCAGC CGCGCTACAT CCAGACCGTC TGGGGGCTGG GCTACGTGCT CGTGCCCGAT
GGCGGCGCGG AGCGCCGGCC ATGA
 
Protein sequence
MDRPGGENGA CVTLARQPTG ETKMGEALAR ILVVDDEQDL RALLQRYLSD QGYAVRALDG 
GQHLERLLGR ERFDVLVLDV MMPGEDGLSL CRRLRARGET IPIVMLTARG DPLDRIIGLE
MGADDYLPKP FNPRELQARI EALIRRQRML GAHTGPLPGD GRIDFGPFSL HLGERRLRRD
GGDIPLTSGE FALLQALARH PGRPLGRDRL IELSRGRDHE ASDRSIDVQV MRLRRAIEDD
PAQPRYIQTV WGLGYVLVPD GGAERRP