Gene Avin_46520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_46520 
Symbol 
ID7763515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4725150 
End bp4725998 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content71% 
IMG OID643807496 
Producthypothetical protein 
Protein accessionYP_002801732 
Protein GI226946659 
COG category[I] Lipid transport and metabolism 
COG ID[COG3000] Sterol desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0374857 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAGCG AAACGATCCG CGACACCCTG GGGCCGCAGG CGCTGCCCTG GTTCGCCATG 
GCCTTCCTCG TGCTGGTCGG CGTCGCCTGC GTCGAGGGGC TGGCGCGCAG CCTGCTGCGC
CCCGGCTCCT ACGACTGGCG GGCCAGCGCC GCCTCGTTCG CCGACGCGCT GATCCGCCGC
GGCGTGGACG CCCTGGGCCT GTCCCTAGTG GCGCCCCTGT TCGTGCTGGC CTACGAGCAC
CGCCTGCAGA GCCTGGGGAT GTCCACGCCG GTGGCTTTCG TCGCCCTGTT CCTCGGCCAG
GACTTCCTCT ATTACTGGTA CCACCGGATG GCGCACCGGG TCCGCTGGTT CTGGGCCTCC
CATTCGGTGC ACCACTCGCC CGGGCAGTTG AGCCTGGCCA CCGCCCTGCG CCTGGGCTGG
ACCGGCCGGC TGACCGGCAA TGGACTGTTC TACCTGCCGC TGGTCTGGCT GGGCTTCCCG
CCGCTGGCGG TGAGCGCCGC GGTGGCGCTC AACCTGCTCT ACCAGTTCTG GGTGCACGCG
CCCTGGATAC CCCGGCTCGG CCCGCTGGAA TGGCTGCTCA ACACGCCCAC CCACCACAAG
GTGCACCACG CCAGCAACCC GCAATACCTG GACTGCAATT ACGGCGGCGT GCTGATCGTC
TTCGACCGGC TGTTCGGCAC CTTCGTCGAG CATCGCCCGG AGATCCCCAT CCGCTATGGC
CTCAGCCGGC CGCTGCACAG CTACAACCCG CTGCGCATCG CCCTGCACGG CTGGCTGGAG
CTGGGCCGCG ACCTGCTCCG TGCGCGCGGC CTGCGCGCCC GCCTGGGCGT GCTGGTCGGG
CCGCCCTGA
 
Protein sequence
MSSETIRDTL GPQALPWFAM AFLVLVGVAC VEGLARSLLR PGSYDWRASA ASFADALIRR 
GVDALGLSLV APLFVLAYEH RLQSLGMSTP VAFVALFLGQ DFLYYWYHRM AHRVRWFWAS
HSVHHSPGQL SLATALRLGW TGRLTGNGLF YLPLVWLGFP PLAVSAAVAL NLLYQFWVHA
PWIPRLGPLE WLLNTPTHHK VHHASNPQYL DCNYGGVLIV FDRLFGTFVE HRPEIPIRYG
LSRPLHSYNP LRIALHGWLE LGRDLLRARG LRARLGVLVG PP